Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04917 ATGGAGCCTCTTTCTTCTACCAAGCTAAATAATAATTTCACTAAACCTTCTTCTCTCCATGTTGAAACTCAACAACCACTTGATGAACCCAGTCCTCTCCGTAAAATCATAGTCGTTGCCTCCATCGCCGCCGGTGTTCAATTCGGTTGGGCACTACAACTCTCTCTCTTAACTCCCTACATTCAGTTACTCGGTATTTCTCATACTTTAGCCCCTTTCATTTGGCTTTGCGGCCCAATTTCCGGTATGCTTGTCCAGCCGATTGTCGGTTACAACAGCGACCGTTGCACTTCACGCTTCGGTCGCCGTCGTCCATTCATAGCCGCTGGTTCAGTCGCCGTCGCTATCGCCGTTTTCTTAATCGGTTACGCCGCTGACCTCGGTCACATGTTTGGCGATAATCTAGACAAAAAAGTCCGTCCACGTGCAATCGGAGTCTTCGTCATCGGTTTCTGGATCCTCGACGTTGCTAACAACATGCTTCAAGGACCTTGCCGTGCACTTCTCGGCGATCTATGCGCCGGTAACCAGCGTAAAACGAGAAACGCAAACGCGTTTTTCTCTTTTTTTATGGCCGTCGGTAATATCCTCGGTTACGCCGCCGGTTCATACAGTAAACTTCACAACATGTTTCCGTTCACGAAAACGAAAGCATGTGATGTTTACTGTGCGAATCTAAAAAGCTGTTTCTTTATCTCGATCGCTTTTTTAACCGTTTTAGTCACCGCGGCTTTGATTTACGTGAAAGAAAAAGCAATCACGACGGAGAAAACGGTTACAGATGAAGACGGTGGTGGTAATAGTAGTAGTATGCAATGTTTTGGGGAATTATCCGGTGCTTTTCGGGAACTAAAGAGACCTATGTGGATTCTATTATTAGTGACGTGTCTTAATTGGATTGCGTGGTTTCCTTTTTTGTTGTTTGATACTGATTGGATGGGAAAAGAAGTTTATGGAGGAACCGTTGGGGAAGGTACGGTGTATGATAAGGGTGTGCGTGCGGGTGCATTAGGACTTATGTTAAACTCAGTCGTTTTGGGTGTGACTTCATTGGGAGTTGATGTGTTGGCGCGTGGAGTTGGGGGCGTGAAGAGGTTATGGGGAATAGTTAACTTTGTGCTTGCGATTTGTTTGGCTATGACGGTTTTGGTTACTAAATTGGCTCAACATTCACGACACTTTGTTGATGGTACTCAAGATCCTCTTCCACCTTCTGCCGGTATTCAAGCTGGCGCGTTGGTTCTCTTTTCCGTTCTCGGAATTCCTCTCGCGATTACTTACAGCATACCCTTTGCTCTAGCATCTATATTCTCAGCAACCTCAGGAGCAGGCCAAGGGCTATCACTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGATTGTCTCTGTTCTGAGTGGACCATGGGATGCTCTATTTGGAGGAGGTAACCTGCCAGCTTTTGTGGTAGGTGCCGTCGCGGCTCTAGCAAGTGGCATACTATCCGTAATCTTACTGCCGTCTCCACCACCAGATATGACCAAGTTGCCTACCGGAGGAGGCTTTCATTAA 1554 0.4653 MEPLSSTKLNNNFTKPSSLHVETQQPLDEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYIQLLGISHTLAPFIWLCGPISGMLVQPIVGYNSDRCTSRFGRRRPFIAAGSVAVAIAVFLIGYAADLGHMFGDNLDKKVRPRAIGVFVIGFWILDVANNMLQGPCRALLGDLCAGNQRKTRNANAFFSFFMAVGNILGYAAGSYSKLHNMFPFTKTKACDVYCANLKSCFFISIAFLTVLVTAALIYVKEKAITTEKTVTDEDGGGNSSSMQCFGELSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGTVYDKGVRAGALGLMLNSVVLGVTSLGVDVLARGVGGVKRLWGIVNFVLAICLAMTVLVTKLAQHSRHFVDGTQDPLPPSAGIQAGALVLFSVLGIPLAITYSIPFALASIFSATSGAGQGLSLGVLNLAIVIPQMIVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSVILLPSPPPDMTKLPTGGGFH 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04917 517 Gene3D MFS general substrate transporter like domains 34 256 IPR036259 -
Trre2g04917 517 MobiDBLite consensus disorder prediction 1 26 - -
Trre2g04917 517 NCBIfam sucrose/proton symporter 32 505 IPR005989 GO:0005886|GO:0008515|GO:0015770
Trre2g04917 517 Pfam MFS/sugar transport protein 44 301 - -
Trre2g04917 517 CDD MFS_SLC45_SUC 36 495 - -
Trre2g04917 517 PANTHER SUGAR TRANSPORTER 33 499 - -
Trre2g04917 517 MobiDBLite consensus disorder prediction 1 25 - -
Trre2g04917 517 SUPERFAMILY MFS general substrate transporter 34 504 IPR036259 -
Trre2g04917 517 FunFam Sucrose transport protein 30 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04917 Trre-Chr2 56731456 56734466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04917 17 517 Sucrose Transporter Gene Family AT1G22710 66.667 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04917 K15378 - gmx:547679 841.262