Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g04870 | ATGTTCAATCTCTCAACTCTTGTTAATCACTCTGATTGGAATCCAAACAATAACTCCAATCCATGTTCATGGAAAGGTGTCACTTGTGACAGTACCAATTCATCTGTCATCAATATTGTCCTACATGGTTCTTCTCTCTCTTCACAATCTCTTCCTGTTTTTTGCAAAATTGAAACTTTGCAGCACCTTGATGTCTCTAATAACCGTCTGAACTCTATCCCAGATGGGTTTATTTCTGCATGTGGAAAAATTGAGAGTTTAAAACTTTTAAATTTTAGTGAAAATATGTTAAGTGGTTTTTTGCCTACTTTTATTGGTTTTGGTGGATTGGAATCACTTGACATGTCTTTGAATAATTTGAGAGGGAGCATTGATAAGCAGTTAGATGGATTAGTTAGTCTCAAGTTGCTTAATCTCGGTTACAATAACTTCAGTGGGAAAATTCCTACTAATTTGGGAAGGTCCATGGTTTTGGAGCAGCTAGTGCTTTCAAACAATATTTTTGAAGGCACTATCCCTGATCAAATTTTGAGCTACAAAAATTTGACTGTGATTGATTTTAAGGTAAATAAGCTTTCAGGGTCTATTCCTTTAAATATTGGAGATCTTTCCAAATTGGTAACTTTGAGTCTTTCCTCTAATAGTCTAGCTGGCAAAATCCCAATTTCCGTTGTGAACATCGAAACACTAGAAAGATTTGCAGCTAATCAAAATAATTTTACTGGTGCTGTTCCTCCTGGAATTACAAATTTTCTAAAGAGTTTGGATCTTAGTTATAATAAGTTATCTGAGTCCATTCCTGAAGGCCTTTTATCTCCACCGCAGTTAGTGCTTGTAGATTTGTCTCATAACATGTTAGAAGGGTTTGTACCAGCAAATATTTCTTCTAGTTTAGTCAGGTTGAGATTGGGAGGAAATTTGCTTACAGGAGAGGTTCCTTCGGGTATTTGCGAAGCCATTCGTGACAACCAATTGACATACATGGAACTTGACAATAATAAGTTGACAGGTTTGATACCTCCTGGATTAGGTTCTTGTAAGAAATTGGCCTTGTTGAATTTGGCTGAGAATCAATTGACTGGTGTATTGCCACCAGAAATTGGTAATCTTAGCTTTCTTCAAGTCTTGCAGCTTCAAATGAACAAGCTTAATAGTACTATCCCTATTCAAATTTCCCAACTTCAAAAGTTGTCTTCATTGAATTTGAGCTATAATTCTTTTGATGGACCAATTCCGTCTGATATACCAATCAACCTTACACTCCTTAACTTGCAAGGGAACAATCTTAACGGGTCTATACCGTCGTCCATTGGAAACTTGCAATATCTTTTAGATGTCCAACTTGGAGAAAATCAGCTAAGTGGTGATATTCCAAAAATGCCTTCAAGTCTACAGATTGCATTGAATCTCAGTAGCAATCACTTTAGTGGAGCTATTCCTAGTAGTTTTAGTGATTTGGTTAACCTAGAAATCTTGGATCTCTCAAATAATAGCTTCTCCGGTGCAATTCCTGAGTCTCTAACTAAAATGTCGGCATTGACACAGTTGCAACTATCAAACAATAATCTATCAGGTGACCTTCCATCATTTGCTCCATACGTTAATGTTGATATAGAAGGAAACAATGTCAAGAATAGCAGTAGTAATGAACCAGTTAACATATTTCCTAGAACACACACGAAAGGGAAATCTGTTGTTGCCGCTGTTCTTATTGCAATTGCTGCTGCTATTTTTGTGGTTGGCATGGTCACCCTTCTGGTTGTATTGGTTTCACGGCACTATTGCAAGGTTAACGATGAACGAGTACAGTCAAATGAAGTTGAAAATCTTGACCTTCCTCAGGTCATCCAGAGTAATTTGTCAACTCCAAATGGAATCCACAGATCAAACATTGATCTCTCCAAGGCCATGGAAGCTGTTGCCGAACCGTCAAACGTAACTCTAAAAACCAAGTTTTCGACTTACTATAAGGCCGTTATGCCATCTGGCTCGATCTATTTTGCCAAGAAGCTGAACTGGTGTGACAAGATATTTCCAGTGAGTAGTGTTGATAAATTTGGGAAAGAGTTGGATGCATTGGCAAAGTTGAACAATTCAAATGTGATGATTCCTCTAGGCTATATCGTGTCCACTGACAATGCTTATGTATTATACGAGTTTGTGTCGAACGGCTCTCTCTTCGATGTGCTTCACGGGAGCATGGAAAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGTGGCTCAAGGTCTCTCTTTTCTGCATGGATTTGCATCTGGTCCGATACTTCTCCTTGATTTATCAAGTAAAAGTATTATGCTGAAATCACTCAAGGAGCCTTTAGTCGGTGATATTGAACACTACAAGGTGATTGATCCTTCAAAGAGTACGGGGAGTTTTTCTGCAGTTGCTGGTTCTGTTGGCTACATTCCTCCAGAGTATGCATACACAATGAGAGTAACAGTGGCAGGAAATGTGTATAGCTTTGGTGTCATTCTACTGGAATTGCTAACAGGCAAATCTGCAGTGACCGAGGGAACTGAATTGGTGAAATGGGTTTTGCGTAATTCAAGAAATCAAGATCACATTCTTGATCCTAATGTTAGTAGAACATCACAGGCTGTTAGAAATCAAATGCTTGCAATTCTGGAGATTGCTCTTGTTTGTGTTAGCACATCTCCTGATGCAAGACCAAAGATGAAGACTGTGCTAAGAATGTTGCTGAATGCCAGATAG | 2745 | 0.384 | MFNLSTLVNHSDWNPNNNSNPCSWKGVTCDSTNSSVINIVLHGSSLSSQSLPVFCKIETLQHLDVSNNRLNSIPDGFISACGKIESLKLLNFSENMLSGFLPTFIGFGGLESLDMSLNNLRGSIDKQLDGLVSLKLLNLGYNNFSGKIPTNLGRSMVLEQLVLSNNIFEGTIPDQILSYKNLTVIDFKVNKLSGSIPLNIGDLSKLVTLSLSSNSLAGKIPISVVNIETLERFAANQNNFTGAVPPGITNFLKSLDLSYNKLSESIPEGLLSPPQLVLVDLSHNMLEGFVPANISSSLVRLRLGGNLLTGEVPSGICEAIRDNQLTYMELDNNKLTGLIPPGLGSCKKLALLNLAENQLTGVLPPEIGNLSFLQVLQLQMNKLNSTIPIQISQLQKLSSLNLSYNSFDGPIPSDIPINLTLLNLQGNNLNGSIPSSIGNLQYLLDVQLGENQLSGDIPKMPSSLQIALNLSSNHFSGAIPSSFSDLVNLEILDLSNNSFSGAIPESLTKMSALTQLQLSNNNLSGDLPSFAPYVNVDIEGNNVKNSSSNEPVNIFPRTHTKGKSVVAAVLIAIAAAIFVVGMVTLLVVLVSRHYCKVNDERVQSNEVENLDLPQVIQSNLSTPNGIHRSNIDLSKAMEAVAEPSNVTLKTKFSTYYKAVMPSGSIYFAKKLNWCDKIFPVSSVDKFGKELDALAKLNNSNVMIPLGYIVSTDNAYVLYEFVSNGSLFDVLHGSMENSLDWASRYSIAVGVAQGLSFLHGFASGPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTVAGNVYSFGVILLELLTGKSAVTEGTELVKWVLRNSRNQDHILDPNVSRTSQAVRNQMLAILEIALVCVSTSPDARPKMKTVLRMLLNAR | 914 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g04870 | 914 | FunFam | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 | 609 | 720 | - | - | |
Trre2g04870 | 914 | Gene3D | Ribonuclease Inhibitor | 3 | 49 | IPR032675 | - | |
Trre2g04870 | 914 | Gene3D | Transferase(Phosphotransferase) domain 1 | 721 | 914 | - | - | |
Trre2g04870 | 914 | SMART | LRR_typ_2 | 252 | 273 | IPR003591 | - | |
Trre2g04870 | 914 | SMART | LRR_typ_2 | 131 | 155 | IPR003591 | - | |
Trre2g04870 | 914 | SMART | LRR_typ_2 | 510 | 532 | IPR003591 | - | |
Trre2g04870 | 914 | SMART | LRR_typ_2 | 486 | 509 | IPR003591 | - | |
Trre2g04870 | 914 | SMART | LRR_typ_2 | 57 | 80 | IPR003591 | - | |
Trre2g04870 | 914 | SMART | LRR_typ_2 | 370 | 394 | IPR003591 | - | |
Trre2g04870 | 914 | Pfam | Leucine Rich Repeat | 60 | 78 | IPR001611 | GO:0005515 | |
Trre2g04870 | 914 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 200 | 910 | - | - | |
Trre2g04870 | 914 | SUPERFAMILY | Protein kinase-like (PK-like) | 652 | 910 | IPR011009 | - | |
Trre2g04870 | 914 | PRINTS | Leucine-rich repeat signature | 486 | 499 | - | - | |
Trre2g04870 | 914 | PRINTS | Leucine-rich repeat signature | 60 | 73 | - | - | |
Trre2g04870 | 914 | FunFam | leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 | 721 | 914 | - | - | |
Trre2g04870 | 914 | Gene3D | Ribonuclease Inhibitor | 50 | 416 | IPR032675 | - | |
Trre2g04870 | 914 | Gene3D | Ribonuclease Inhibitor | 417 | 464 | IPR032675 | - | |
Trre2g04870 | 914 | Gene3D | Ribonuclease Inhibitor | 465 | 547 | IPR032675 | - | |
Trre2g04870 | 914 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 292 | 547 | - | - | |
Trre2g04870 | 914 | ProSiteProfiles | Protein kinase domain profile. | 641 | 914 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g04870 | 914 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 151 | 244 | - | - | |
Trre2g04870 | 914 | Pfam | Leucine rich repeat | 468 | 523 | IPR001611 | GO:0005515 | |
Trre2g04870 | 914 | SUPERFAMILY | L domain-like | 18 | 313 | - | - | |
Trre2g04870 | 914 | Pfam | Leucine rich repeat N-terminal domain | 10 | 30 | IPR013210 | - | |
Trre2g04870 | 914 | SUPERFAMILY | RNI-like | 254 | 544 | - | - | |
Trre2g04870 | 914 | Pfam | Protein tyrosine and serine/threonine kinase | 683 | 910 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g04870 | 914 | Gene3D | Phosphorylase Kinase; domain 1 | 607 | 720 | - | - | |
Trre2g04870 | 914 | ProSiteProfiles | Leucine-rich repeat profile. | 59 | 80 | IPR001611 | GO:0005515 | |
Trre2g04870 | 914 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 1 | 150 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g04870 | Trre-Chr2 | 56284759 | 56287644 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g04870 | 110 | 910 | Receptor kinase-like Gene Family | AT2G41820 | 38.748 | 5.26e-146 | 453 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre2g04870 | PK_Tyr_Ser-Thr | 3.3e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g04870 | - | - | gmx:100796647 | 1152.89 |