Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04808 ATGCCGCCGGAACCATTGCCTTGGGATCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAGTCTCTTGGGTCGGTGGCGAGATGGAGAGATTCGTCTCATCATAGAGACTTCAATCGATGGGGATCCGCCGATTTTCGCAGACCGCCAGGTCATGGTAAGCAGGGTGGTTGGCACATGTTTTCTGAAGAGCCTGGTCATGGTTATGGGGTTTCTCGGTCCGGTGACAAGATGTCGGAGGAAGATAGTCGGCCGTCAGTTTCACGGGGTGATGGAAAATATGGCAGGAGTAGTAGGGACAATAGAGGAGGTCCCTTTGGTCAGAGAGATTGGAGAGGTCATTCGTGGGAAGCCACCAATGGCACTCCAAATTTATCGAGGAGGCCACAAGATATGAATAATGATCAGAGGTCAGTTGATGATTCCCTAACATATTCCTCTCAGCAGCATTCTGATTTTGTCAACACTTGGGAACAACATCAATCGAAAGACCAGCATGATAAGATGGGTGGTGTTAATGGGTTGGGAACAGGCCCGAGATGTGATAGGGAGAATTCTTTGGGTTCGATTGACTGGAAGCCACTTAAGTGGACCCGATCTGGAAGCTTGTCTTCTCGAGGCTCTGGTTTTAGTCACTCAAGCAGCTCAAGGAGCATGGCAGGGGGAGATTCCTATGAAGCAAAGCCTGATTTGCAACCCAAAAATGTCACTGCTATCGAGTCGCATTCAGGGGAAGCCACTGCATGTGTGACATCTTCTATGCCTTCTGAAGATACAACGTCTAGGAAGAAGCCTAGACTAAATTGGGGTGAAGGACTCGCAAAGTATGAGAAGAAAAAAGTTGACATACCTGATCCAGGAGCAAACAAAGATGGCTCGGTCTCATCTGCTGGTAATATGGAACCTTGTAATATGACCAGCCCCAACTTGGTAGATAAAAGCCCGAAAGGTATAGGATTTTCGGATTGTTCATCTCCTGCAACTCCATCGTCTGTTGCTTGCAGTTCCTCACCAGGCGTGGATGATAAGTTATTGGGAAAGGCAGCAAATGCAGGCAATGATGTTAGTAATTTGACTGATTCACCAGCTCCTGGGTTCCAGAATCACCTGCAGAAGTTTTATCTCAGCCTTGATAAATTGGATATGGACTCGTTGAATAATTTGGGCTCTTCAATTGCTGAGTTAGTACAGTCTGATGATCCAAGTTCTGAAGATTCTGGTCTAGTTAGGTCCAATGCAATTAATAAGTTACTGCTATGGAAAGCGGACATTTCAAAGGTGTTGGAGATGATGGAATCTGAAAGTGATTTGCTTGAAAATGAACAAAAGTCTCTAAAATCTGAATCTGTGGATATATATCAGTGTCCAGTGGCATTGGGCTCAGAAGAACATGAAGTATCTCAGAAGGTCATTCGGCCAGTACCGTTGGAAATCATTTCTTCTGATGAACCCAATGCAGAGAAGATGCCGCCTAATTTATGTAGTATTCATGAAAATGACAAGGAAGAGGATATTGATAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCCGCCTTTGGTAAAAGCAGTTTCGTCATGTGATACTGGGGGATTTGGTAACTTTTCAAGGAACATGGATACTATTCGATCTACTTCGATGAAATGCTTAGTCCGCTGTACTACTAGGAAAGATGCTAGTGCATCTGCTTGTAATGATGTCAATACACCTGCAGAAGTAAAGGAAAGCTTGGATGATGCTACTGACGGGCCAAACTTATGTTCTAGCTATGAGGATACTTATAACTCAATTATTGCTTCAAATAAAGAATCTGCTAACAGAGAGCATGAAGTATTTGCTAAGTTAGTGCCAAAAGAATGTAAAAAGCTTGGTAATATGGGAGTCAGTAGTGATATGTCCTCTCATACATTCATTATGGAAAAAATTTCTGAGAAAAAACGGTTTGAAAAATTTAAGGAGAGTGTTATTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTGTCTGTTAGGAAATGCCGCCCAAAATCTCATAAGAAAAACGAACTAGGTGTGCGAACTACCTGTAGCAGTAATATGAAGAACCGATCTTCCATCCGTTCACGGTTTCCTTTCCCTGCTGGAAATCATCTAAGCTTGGTTCCAACAGCAGAGATCCTTAATTTCACAAGCAAACTTCTTTCAGAGTCCCAACCTCAACTTCAGAGGAACACACTAAGGATGCCAGCATTAATATTGGATGAGAAGGAGAAGATGGTTACAAAGTTCATATCTAGTAATGGGCTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGAGATATGATCAATCCTTGGATATCAGAAGAAAAAGAAATTTTCTTGGAGAAATTTGCTGTATTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCGGACTGTGTTGAGTTCTACTACAAGAATCACAAATCTGAATGTTTTGAGAAACTGAAGAGGAAAGATGTTGGTAAGCTAGGGAAGTCATTTTCAGCTAAAACTAACTTGATGGCATCAGGTAATAAAAGGATGCGGTCAGGAAGATTCCTTTTAGGGGGATATGGTAATGTTAAAGCATCAAGAGCAGAGGACAGCAATATTGAGAGACCAAACAGTTTTGACATTCTTGGGGATGAAATGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCACTTTCATCTGAAGCTATGAGTTCCTGCATAACAAGTTCATTTGATCCTGTGGATGGTAACAAGGAAAGGAAGTTCTTGAGAGGGAACCCTCTATGCAAACAACCTTTGGTGCATGATATTTCTCAGAATGCTGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAGTGGATGTTTCTGAGTGGACAGACGATGAGAAGGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTCGCGAAGATAGCACGGTGTGTAGGTACAAGGTCCCGAGAACATTGCAAAGTTTTCTTCAGCAAGACTCGGAAAGTCCTTGGATTGAATCTTGCACACCCCATTCCTGGAATTGTCGAATCCCCGCTGCATGATGATGCAAATGGTGGTGAGAGTGACACAGATGATGCATGTGTTGTTGAGGCAGGCTCAGTGGTTGATGCTGATAAGTCTGGAAATAAAACAGATGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGACGAATACAATCCTATGGAAGCTAGGAGCCCGTCAGCTGAATTAAATGAATCAAGAGAAATCAGTGAGACAGAAGTACGTCTTGAAAATGTAGACGTGGCTTCCAATGTTTGTGCAATTAAGGTTGAATCTAAGCTGGGATCTGATGGTAGTGGGGTTGACTTGGGCAAAACCGACAAGTCTGGTTCAGTCAATGGGGTTGGCTTGGGAGACGCAGTTAGAGAATCAATTTCTGCTTCGGGAGTAATTGAACCATGGGAGTGTGGTTCTGTTGCTGTGGATAGACTGGTTTATGAGGGTTCTTCTGCGGTTTTTGGAAATGGAGTGGACAGGCAAGTAGTGTCAGCACCTCAATGTGTTGATGACAGAGGTGATAAACATGAAGCTGATGCAGGTATTGTAGTTGAGTTGAAAAACTGTGTGTTAGAGTCGAGCACTGCAGCAAATGTTTCATTCTCACCAGTGGTCAATTCATATTCAGGATTGAGTTTTGGTTCTGAAAATAAGCACGTGCCCTTTGGAAAGCCTCATACCTCAGTATTATCTACAAATGATCCTCGGTCAACTGTAAATTCATTGTTTCTAAAATCTTCTGCTTCTCAGTGTGAAAAAACAGTTAACCAGGATAGACTGTCCTCAACTTGTGATAGTCAGGGAGGTAGAGATATGCGATGTCATAGCTCAGGTAGCAATGGTGAACATCAGCTTCCTCTTCCAGGGAACCATGTCGAGACTGTCAGCGTCCTCCAGGGCTATCCCATGCAAGTGCCCATCAAGAAAGAAGTGGACGGGGATGTGAATTGCTGTAGTTCTGCGACTGATTTGCCTCTTCTGCCCCACAAAGTCAAACAGACTGATGATCATTTCAAAACATTATGGCATTCTCCGGATTCAGAAAAAACTTCCGGAAATGGTGATGTGAAACTGAAACTGTTTGGAAAGATACTGACAAATCCTTCTTCTTCCACTCAGAAACCTAATTTGATTACAAAGCGAAGTGAAGAAAACGGCACCAGTCATCCAAAGTTAAGCAACAAGTCTTCTAATCTGAAATTTACTGGTCATCAAAATTCGGATGGGAATTTGAAAATTTTGAAGTTTGACCGTAGTGATTATGTTGGCCTTGAAAATGTTCCGGTGATGAGTTATGCTTATTGGGAGGGGAATGGAATACAGAGTAGACAGCCTGGTCTCTCATCATTGCCCGATTCTTCATTCTTGTTAGCTAAATATCCTGCTGCCTTTAGTAATTATCCTATACCATCTTCCAATTTGGAGCAACAACCATTGCAGGCATTTGCCAACAATAGTGAACGGCATTTGACAGGTGCGTCCAGTTCATCTAGTTTCATAGCTAGAGACAACAATGGCAGCAATGCTATGCTTGATTATCAGATGTTTAGAAGTAGGGATGGTCCACAAGTGCAGCCATTTATAGTAGATGTCAAACACCGCCAAGATGTATTCTCTGAGATGCAGAGAAGAAACAGTTTTGAAGCAATCTCTAGTTTGCAACAGCAGGGGAGGGGAATGATGGGAATGAATGGTGTTGGAAGACCTGGTATTCTAGTGGGAGGGTCGTGCAGTGGTGTCTCAGATCCCGTGGCTGCAATCAAAATGCATTATTCCAATTCTGACACCAAGTATGGTGGTCAGAATGGGAGTATTGTAAGAGACGATGAATCTTGGGGAGGGAAGGGGGACTTAGGCAGGTAG 4965 0.431 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSADFRRPPGHGKQGGWHMFSEEPGHGYGVSRSGDKMSEEDSRPSVSRGDGKYGRSSRDNRGGPFGQRDWRGHSWEATNGTPNLSRRPQDMNNDQRSVDDSLTYSSQQHSDFVNTWEQHQSKDQHDKMGGVNGLGTGPRCDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSMAGGDSYEAKPDLQPKNVTAIESHSGEATACVTSSMPSEDTTSRKKPRLNWGEGLAKYEKKKVDIPDPGANKDGSVSSAGNMEPCNMTSPNLVDKSPKGIGFSDCSSPATPSSVACSSSPGVDDKLLGKAANAGNDVSNLTDSPAPGFQNHLQKFYLSLDKLDMDSLNNLGSSIAELVQSDDPSSEDSGLVRSNAINKLLLWKADISKVLEMMESESDLLENEQKSLKSESVDIYQCPVALGSEEHEVSQKVIRPVPLEIISSDEPNAEKMPPNLCSIHENDKEEDIDSPGSATSKFVEPPPLVKAVSSCDTGGFGNFSRNMDTIRSTSMKCLVRCTTRKDASASACNDVNTPAEVKESLDDATDGPNLCSSYEDTYNSIIASNKESANREHEVFAKLVPKECKKLGNMGVSSDMSSHTFIMEKISEKKRFEKFKESVIALKFKALHHLWKEDMRLLSVRKCRPKSHKKNELGVRTTCSSNMKNRSSIRSRFPFPAGNHLSLVPTAEILNFTSKLLSESQPQLQRNTLRMPALILDEKEKMVTKFISSNGLVEDPLAIEKERDMINPWISEEKEIFLEKFAVFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKLKRKDVGKLGKSFSAKTNLMASGNKRMRSGRFLLGGYGNVKASRAEDSNIERPNSFDILGDEMETAAAADVLAGICGSLSSEAMSSCITSSFDPVDGNKERKFLRGNPLCKQPLVHDISQNADDETCSDESCGEVDVSEWTDDEKAAFLQAVSSFGKDFAKIARCVGTRSREHCKVFFSKTRKVLGLNLAHPIPGIVESPLHDDANGGESDTDDACVVEAGSVVDADKSGNKTDEDLPSDALNTFHDEYNPMEARSPSAELNESREISETEVRLENVDVASNVCAIKVESKLGSDGSGVDLGKTDKSGSVNGVGLGDAVRESISASGVIEPWECGSVAVDRLVYEGSSAVFGNGVDRQVVSAPQCVDDRGDKHEADAGIVVELKNCVLESSTAANVSFSPVVNSYSGLSFGSENKHVPFGKPHTSVLSTNDPRSTVNSLFLKSSASQCEKTVNQDRLSSTCDSQGGRDMRCHSSGSNGEHQLPLPGNHVETVSVLQGYPMQVPIKKEVDGDVNCCSSATDLPLLPHKVKQTDDHFKTLWHSPDSEKTSGNGDVKLKLFGKILTNPSSSTQKPNLITKRSEENGTSHPKLSNKSSNLKFTGHQNSDGNLKILKFDRSDYVGLENVPVMSYAYWEGNGIQSRQPGLSSLPDSSFLLAKYPAAFSNYPIPSSNLEQQPLQAFANNSERHLTGASSSSSFIARDNNGSNAMLDYQMFRSRDGPQVQPFIVDVKHRQDVFSEMQRRNSFEAISSLQQQGRGMMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDTKYGGQNGSIVRDDESWGGKGDLGR 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04808 1654 MobiDBLite consensus disorder prediction 1400 1438 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 76 109 - -
Trre2g04808 1654 Gene3D - 944 1028 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 294 313 - -
Trre2g04808 1654 Pfam Myb-like DNA-binding domain 976 1016 IPR001005 -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 117 158 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 238 260 - -
Trre2g04808 1654 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 862 1652 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 8 45 - -
Trre2g04808 1654 CDD SANT 976 1015 IPR001005 -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 200 223 - -
Trre2g04808 1654 ProSiteProfiles SANT domain profile. 783 834 IPR017884 -
Trre2g04808 1654 ProSiteProfiles SANT domain profile. 972 1023 IPR017884 -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 261 288 - -
Trre2g04808 1654 SUPERFAMILY Homeodomain-like 974 1023 IPR009057 -
Trre2g04808 1654 Gene3D - 764 836 - -
Trre2g04808 1654 SUPERFAMILY Homeodomain-like 771 832 IPR009057 -
Trre2g04808 1654 SMART sant 973 1021 IPR001005 -
Trre2g04808 1654 SMART sant 784 832 IPR001005 -
Trre2g04808 1654 Coils Coil 423 450 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 1294 1321 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 1632 1654 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 1 313 - -
Trre2g04808 1654 MobiDBLite consensus disorder prediction 1294 1318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04808 Trre-Chr2 55713354 55722169 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre2g04808 Myb_DNA-binding 6.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04808 - - gmx:100810588 2243