Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04783 ATGCGGTCAATCCCACTTGGAACCTCAGTATCTCCAAAACCTATAAACACTTCAAAAATTTCATCTTTTAATATTAATTTTAAGAAATCAAATACTTCTCCATCTTGGGTTTCACCTTCATCTCATGAAGTCTCTATTTTCTCTCTATCTCAATCAGGAATATGCAGAGCCAGTCAAGTTGTTGATTTGTTTCCAATCGTGTCTCCCGACATTACTGTGAGAGAGGCGAGATTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTTCCTGAATATTCCTTTCCGTTAGATTTTGTGTTGAGGATGGATAGATTGGTGGCTATGTTAGCAGGATTCTCTTTACCGAATGGTTGCAAAAGAACCTGTTTGGTTGCTGTTATTGGCAATTCACTTGATCAAACTTTTTTATTTGGAAGTAAAGATTTTAAAATTGCGGGTTTTGATGGAAAAGTAAGCCTCAACAAGGGTTATGTGGCTGGCATATTAACAGTGGATACTGTTGCAGATTTTCTACCTAAAAAGGGGCCGCTTCGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTAAGAGAAAAATTTAGAAAGAAAGGAATAGCGAAACAATTGGTGGCCAAGGCAGAATCACAAGCAAGAAATTGGGGATGTCGCTCCATTGCATTACACTGTGATTTACGGAATCCTGCTGCGACAAAGTTATACGAAGGCCAAGGTTTCAAATCTATAAAGGTTCCAGATGGAGCTAACTGGCCTCAACCAAAAACTTCACCAGATGTTAAGTTCAACTTCATGATGAAGCTTCTCAACAAATCAGCAGTTTCTAAAACTAACTAA 852 0.392 MRSIPLGTSVSPKPINTSKISSFNINFKKSNTSPSWVSPSSHEVSIFSLSQSGICRASQVVDLFPIVSPDITVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFSLPNGCKRTCLVAVIGNSLDQTFLFGSKDFKIAGFDGKVSLNKGYVAGILTVDTVADFLPKKGPLRQRRTGIAYISNVAVREKFRKKGIAKQLVAKAESQARNWGCRSIALHCDLRNPAATKLYEGQGFKSIKVPDGANWPQPKTSPDVKFNFMMKLLNKSAVSKTN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04783 283 Pfam Acetyltransferase (GNAT) family 162 245 IPR000182 GO:0016747
Trre2g04783 283 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 65 249 IPR016181 -
Trre2g04783 283 CDD NAT_SF 187 228 - -
Trre2g04783 283 Gene3D - 68 249 - -
Trre2g04783 283 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 71 276 IPR000182 GO:0016747
Trre2g04783 283 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 277 - -
Trre2g04783 283 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 71 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04783 Trre-Chr2 55385521 55387491 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre2g04783 Acetyltransf_1 5.7e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04783 - - gmx:100305894 480.715