Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04769 ATGGCAAAGAAAACTCACTCTTCTCGTCAACCTTCCTCACAAATCCCACATGCAAAAAAACCCACTCAAGATGATGTTGATCCATCACTAACAACACCCCCTCCTTCAAAATCCTCACCCCCTTCTCAACCACCTCCCTCTTCTAACCCCTCCCGTCCTAACCGTTCCAAAAAACCAACACCCGTCGCCGCCGCTGCAGCTGCCGCCAAATCCTCCAAGAAGTCTCATACCCCTTTCTCCAAAAATGATGTAATCCTCATCCTCAAAGCTCTTTCAGATTTCAAATCTCAAACTGGAAACGATCCAACCAAACACACCGAAGAATTTCATGAGTCATTGAAGGATTCACTCAGCATCAAAACTACAGTTAGGAAGCTAAGAGAAAAGGTTAGAGTTTTGAAGCTGAAATTTGAGAAGATCCGTGAAAACAATGAAAAAGATCTTACTTTTTCTAGCTCTCATGAGAAGGAAGTTTTTGAACTTTCTAACAAATTTTGGGGTCAAGAGGAAAGAGTTGAAGAAAAAGAAAAAACACCCAAGAAGAAAAAAGTTGCTAAGAAACCTGCAAAGGAAGAATCTGAAAAGGTTGAAAGTAGTGATAAAATGGGTCATCTTAATTTGAGTGAAAGTTTGGTTTTTGATGAAATGTGTATGGGTTTGAATGTGTTGAAGAGGGGGTTCGAATTGATTGGGGAAGCAGAGAGGGAAGAGTTGGTAACAAGGTGGAAGAAGTTGAAAGCTAAGGAAATGGAAGTGAAGCATGCATTTGCTGGTCCTTTAAAGTACACTGAATTACAAGAGAGAGTCTTTAGCAGAGAATTTACATAG 828 0.4046 MAKKTHSSRQPSSQIPHAKKPTQDDVDPSLTTPPPSKSSPPSQPPPSSNPSRPNRSKKPTPVAAAAAAAKSSKKSHTPFSKNDVILILKALSDFKSQTGNDPTKHTEEFHESLKDSLSIKTTVRKLREKVRVLKLKFEKIRENNEKDLTFSSSHEKEVFELSNKFWGQEERVEEKEKTPKKKKVAKKPAKEESEKVESSDKMGHLNLSESLVFDEMCMGLNVLKRGFELIGEAEREELVTRWKKLKAKEMEVKHAFAGPLKYTELQERVFSREFT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04769 275 Coils Coil 123 143 - -
Trre2g04769 275 PANTHER BNAANNG10740D PROTEIN-RELATED 9 253 IPR007592 GO:0006355
Trre2g04769 275 MobiDBLite consensus disorder prediction 1 81 - -
Trre2g04769 275 MobiDBLite consensus disorder prediction 33 52 - -
Trre2g04769 275 MobiDBLite consensus disorder prediction 170 201 - -
Trre2g04769 275 MobiDBLite consensus disorder prediction 1 32 - -
Trre2g04769 275 Pfam Protein of unknown function, DUF573 78 167 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04769 Trre-Chr2 55249876 55251801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04769 22 167 GeBP Transcription Factor Family AT1G61730 29.240 1.23e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre2g04769 DUF573 1.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04769 - - tpra:123919552 266.159