Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04760 ATGGATATCACAATAACATCAAAAGAAATAATCAAACCATCATTGCCAACACCAAATGAACACAAATTCTTCAAACTCTGCCTATTTGATCAGCTTCAATTAATCACTTATTTACCAATGGTTTTGTTTTACCCCAAAAAAGAAGGCCTAACAGAAATATCCCATTTCATTGCTCAATTAAAAAAATCACTTTCTGAAACACTAACCATTTTCTATCCTATAGCAGGCAGAAGAAAAGACCAAACATTTATCACTTGTAATGATGAAGGTGTTGTTTACTTGGAAGCCAAGGTAAACCATACCATGATTGAATTCCTCAATCCACCTAAGCTAGAATTTCTAAATAAATTGCTTCCATGTGAGCCTAATAAGATGCATCAAAATGGAGAAGATTTACCACAAGTCCTTGTACAAGTTAACATGTTTAATTGTGGTGGAATAGCTATAGGTACTTGTAATCTCCATACCCTCTTAGACGGTTGTTCCGGCAGCCTTTTCCATATTACTTGGGCAGCCATTTGTCGAGGCTGCTCTAGCGAAGAATTACCACGCCCCGATTTCTTTTCCGCTTCTTCTTGCTTTCCAACAATAAATCATGCTAGTAAGAATACTAATGAGGACTTAGATGGACAAAAAAAATGTAGCACAAGAAGATTTGTGTTTGGTTCTGAATCCATTGTCACTCTAAGAGATGAAGCAAAAAACGACAACGACGATGACAATGACAATGATGATGGAAGATCAAAGTTTCCTACAAGATATGAAGCATTGGTTGCTTTTATTTGGAAACACATGACACTGGCATGTATAATGGAGGGAGGTGTAGATAGCAAAAGACCATCATTGGCTATACATATTGTGGACATGAGGAGAAGGATGGGTGAGCCTTTTTCTAAATACACAATAGGCAACATTTTATGGCCAGTGATGGTGTTTTGTGAAGAAGTTAATGAAGAAACTAATATTAAATACTTGGTTAAAATTTCTAAGGAGAAATTTGGGAAAATTTCAAGGGAATTATTTTTAAGAGTGAAGAGTGATCCAAGTATGTTAGGGAGCAATGAATGTGTGGATTTGCCACAAGGTATAGAAACAACAAGACCAATTCCAGTTGTTTTGACAAGTTGGTGTGGTTTGAATTTTAGTGAGCTTGATTTTGGTTGGGGGAAGCCTTTTTGGGTTGGAGTTAGAGGTGGTGATCAAGAAACTCTTCCTAATGTAGCTGTTATTATGGAAACATATGAAGGCATGGAAGCTTGGGTGACAATGGAAATGCAACATATAGCTAACTTGGAAAATGATATGGAGTTTCTTAAATTAGCTTTGTCTAATCCTAGTGTTTCAAACATTTAG 1353 0.3622 MDITITSKEIIKPSLPTPNEHKFFKLCLFDQLQLITYLPMVLFYPKKEGLTEISHFIAQLKKSLSETLTIFYPIAGRRKDQTFITCNDEGVVYLEAKVNHTMIEFLNPPKLEFLNKLLPCEPNKMHQNGEDLPQVLVQVNMFNCGGIAIGTCNLHTLLDGCSGSLFHITWAAICRGCSSEELPRPDFFSASSCFPTINHASKNTNEDLDGQKKCSTRRFVFGSESIVTLRDEAKNDNDDDNDNDDGRSKFPTRYEALVAFIWKHMTLACIMEGGVDSKRPSLAIHIVDMRRRMGEPFSKYTIGNILWPVMVFCEEVNEETNIKYLVKISKEKFGKISRELFLRVKSDPSMLGSNECVDLPQGIETTRPIPVVLTSWCGLNFSELDFGWGKPFWVGVRGGDQETLPNVAVIMETYEGMEAWVTMEMQHIANLENDMEFLKLALSNPSVSNI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04760 450 PANTHER F21J9.9 4 439 - -
Trre2g04760 450 Gene3D - 1 205 IPR023213 -
Trre2g04760 450 Gene3D - 211 441 IPR023213 -
Trre2g04760 450 Pfam Transferase family 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04760 Trre-Chr2 55194345 55195697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04760 1 432 Monolignol Biosynthesis Gene Families AT5G48930 23.246 1.90e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04760 - K13065 gmx:102668997 688.337