Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04758 ATGTGCAAATCAAAAAAGAGCACCACCGTGGTACAACCCACAAGAAGAAGAATCTCAACATCATCTTCCACAAATTTCCCATCATCTTCTTCCAACACTGAATTTCCAATCACAGAATCAACAAGTTACGTATACGGTGGTGGAGAGACAACAAAGATAAACATGTCCAAAACTTCTTCATCAGTTTCAAGTCACTCTTCTCTTTCAAGCCTCAAACAATCTCTCCCTGAAAATCCTCACATCTATCCTTTCTCAGAAATCTCAACCGCCACCACTAACTTCTCCACCAACCGTCTCTCCTCAAATTCCTTCCGTTGTTTTCTTCGCGATCGCGACGTCGTCGTTTTCCAGCGTAAATTTCGCCGGAAAATAGACATCCCGGAGCTTCGTGATCGACTTGCTCTTATCTGCCGGAGTCATCATAGCAGCTTAGTGAAGCTTCTCGGAGCTTCTGTCTCCGGTGGATACATTTATCTTGTTTATGAATTTGTTTCCGGTGCTAATCTTTCCGATTGTCTTCGAAATCGTCGGAACCCTAGCTTTACTAATCTCTCGACGTGGACTTCGAGGATGCAAATTGCTTCCGATCTCGCTCACGGTCTTGATTATGTTCATAATTCTTCCGGTTCAGGTTCTGGTTTTGTTCATAATCATATCAAAAGCTCTAGCATAATCGTCTCCGAGGAGAATTTCGGTGCTAAGATTTGTCACTTCGGTACATCGGAGCTCTGTGGTGAGTCTGTTACCGTCGGAGATTCTTCTGTATCGGACAAAAATTTGAAGAGGTCCGGTAGCCGGGAAGTGAGATTTGAGGGGACGAGGGGTTACATGGCGCCGGAATTTCAGGTAACCGGCGTTGCGACGCAGAAGACGGACGTGTACGCGTTTGGCGTGGTGATTCTGGAGCTTCTGAGCGGTTTAGAAGCGGTGAGATTTGAATTGGAGGGAAATGACGGCGGTTATAGGAGGGTGAGTGTTGTGGATACGGCGAGGGAAGCGTTGAAGGAGCACGGTGGCGTGAGAAAATGGGTTGATCGGAGATTAAAGGATTCGTTTCCGATGGATGGGTCTGAGAAAATGATTCGGGTCGGGTTAGAATGTGTTTCGGAGATTCCGAAAGAGAGACCGGGTATGGGTCGGGTATCGATGGAAGTATCCAAGTTGTATTTGGAATCAAAGGAGTGGGAAGAGAAATTGGGGACTAACATTGATTTTTCGGTCTCATTAGCGCCACGCTGA 1239 0.4633 MCKSKKSTTVVQPTRRRISTSSSTNFPSSSSNTEFPITESTSYVYGGGETTKINMSKTSSSVSSHSSLSSLKQSLPENPHIYPFSEISTATTNFSTNRLSSNSFRCFLRDRDVVVFQRKFRRKIDIPELRDRLALICRSHHSSLVKLLGASVSGGYIYLVYEFVSGANLSDCLRNRRNPSFTNLSTWTSRMQIASDLAHGLDYVHNSSGSGSGFVHNHIKSSSIIVSEENFGAKICHFGTSELCGESVTVGDSSVSDKNLKRSGSREVRFEGTRGYMAPEFQVTGVATQKTDVYAFGVVILELLSGLEAVRFELEGNDGGYRRVSVVDTAREALKEHGGVRKWVDRRLKDSFPMDGSEKMIRVGLECVSEIPKERPGMGRVSMEVSKLYLESKEWEEKLGTNIDFSVSLAPR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04758 412 SUPERFAMILY Protein kinase-like (PK-like) 106 385 IPR011009 -
Trre2g04758 412 Gene3D Transferase(Phosphotransferase) domain 1 165 406 - -
Trre2g04758 412 PANTHER OS09G0572100 PROTEIN 1 412 - -
Trre2g04758 412 MobiDBLite consensus disorder prediction 1 34 - -
Trre2g04758 412 Gene3D Phosphorylase Kinase; domain 1 52 163 - -
Trre2g04758 412 ProSiteProfiles Protein kinase domain profile. 39 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g04758 412 Pfam Protein kinase domain 132 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04758 Trre-Chr2 55148937 55150175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04758 77 402 Receptor kinase-like Gene Family AT1G51940 33.136 3.69e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre2g04758 Pkinase 1.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04758 - - mtr:11414164 627.091