Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04751 ATGTGTAGTTGGAGATTGTTTCTATGGTTTGTTTTAACATTAAGCTTCTTATTTGGGAAGAAGATGCATTGTCAAGATATGAATGACTATGACCAAATTGATAACCCTGCTGTTCTTCCTCTTATCACTCAGCTTGTTTATAGCAGAATTTCCAATTTGACTTCAATTCTTAGTCACCAAATTAGTGCTGACTCCAATTTCTGTGTCAAAGATCCGGATTCTGATTGGAATCAAGCCTTTAATTTTTCATCAAATTTGGGCTTCTTGGAATCTTGCATTAAAAAGACAAAAGGAGATATTTCAAACCGCTTGTGTACAGCCGCAGAAGTGAAGTTTTACTTAAATAGTTTAATGGAGAAATCTACAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTTTCTGGTTGTGAGCCGGGATGGGCATGTCGTGTTCCCCCCTCAAGCCAGAAGATTGACCTTAGAGATTCAAAGGAGATGCCTTCTAGAACTTCAAACTGTCGAGCATGTTGTGAAGGCTTCTTTTGTCCTCACGGTATCACGTGCATGATACCATGCCCTCTAGGTTCCTATTGCCCCCTTGCTACGCTCAATAAAACAACTGGTGTATGTGAACCATATCTTTATCAACTACCTCCAATGAAGCCAAACCATACCTGCGGAGGAGCAAATACTTGGGCTGATTTCAGTAGCAGTAGTGAAACATTTTGCTCAGCAGGATCCTATTGTCCAACAACCACCCAAAAATTTCCTTGCAGTAGTGGGCATTACTGCAGGACGGGTTCCACATCTGAGAAAAGATGTTTCAAACTGAGTTCATGTAATTCAAACACAGCAACCCAAAACATGCATGCATATGGAGTTATGCTCATTGCAGCTTTGAGTACTTTGCTACTCATTATTTACAACTGCTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAGTGGCAAAATCAAGAGAAGCAGCGGCTACAAGTGCAAGGAAAACTGCAAATGCACACCAAAGATGGAAATCTGCAAAAGATGCTGCTAAGAAGGGTGCATCTGGGCTGCAAGCTCAGTTATCACGCAAATTCTCTCGTAAAAAGGACGATGAAAATCTTGAAAAAGTTAAGATTTTGAATCAAGAGGCTTCTGAAACAGATGTTGAATTGTTGCCGCATTCACAACCTTCAAGCATGGTTGCAAGTTCATCTGCAGCGGCAGCGCCAACTGAAAAGGGGAAAAATCCAAGTGGACTAATGCATATAATGCATGAAATTGAAAATGATCCGCATGTTAACGACAATCCTAATACAGAAAGAGAAAGTAGACATAAAAGTGTTACAAAGGAAAAACAGCCACATACTAATACACAAATTTTTAAGTATGCATATGCTCAACTTGAAAAAGAGAAGGCTCAGCAACAACAAAACAAGAACCTTACCTTCTCAGGAGTATTAAAGATGGCTACAAATACTGAGAAAATGAAAAGGCCTTTTATTGAGATTTCTTTTAAAGATCTGACTCTCACACTTAAATCTCGAAACAAACATATATTGAGAAATGTTACGGGGAAAATCAAACCTGGCCGTATCACTGCTGTCATGGGTCCGTCAGGGGCTGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAGGCATTTGGATGCCTGGTTAATGGTTCAATTCTTATAAATGGAACACACGAATCAATTCATTCCTTTAAGAAAATTATTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACTTGACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGTTATCAGCTGATTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGGAATTCGGTAGTTGGAACAGTGGAAAAGCGAGGTATCTCTGGAGGCCAAAGAAAGCGAGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCACTTTTGATGCTAGATGAACCAACATCCGGCCTGGACAGTGCATCATCTCAGCTCCTTCTAAGAGCATTAAGACGCGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCTAGCTATGCTTTGTTCAACATGTTTGATGACTTGATACTTCTGGGTAAAGGTGGTCTCATGGTCTATCACGGATCTTCCAAGAAAGTTGAAGAATACTTTTCAGGTTTGGGGATCAATGTTCCGGAGCGGATCAACCCTCCAGATTACTATATTGACATTTTGGAAGGCATAGCAGCACCTGATGGAAACTCGGGACTCCGTTATGAAGATCTGCCAATTAAATGGATGCTTCATAATGGATATCCAATACCTCTTGAGATGAGGCAGCATGCAGCACAGTTTGATATACCACAGAGTGTAAATCTAGCTAATGAATCAGATGAAGTGGGAAAGACGTTTGCTGGAGAGTTATGGAATGACGTGAGAAACAACGTGGAACTGCGAGGGGAAAAGATAAGAATTAACTTTTTAAAATCCAAGGATTTATCTGGCCGAAAAACTCCTGGCGTATTTAAGCAATATAAGTACTTTCTTATACGTGTTGGGAAGCAGAGATTACGAGAAGCTAGAATCCAAGCGGTAGATTATCTTATTTTGTTACTTGCTGGAGCTTGTTTAGGATCAATTACCAAATCGAGTGATCAAACGTTTGACGCATCTGGTTACACCTATACGGTGATTGCAGTATCTCTTCTATGCAAAATAGCGGCGTTGAGATCATTTTCTCTGGATAAATTGCACTATTGGAGGGAGAGTGATTCCGGCATGAGTAGCTTAGCTTATTTTCTCTCGAAAGACACAATGGATCATTTTAATACAGTGATCAAGCCTGTGGTGTACCTATCTATGTTCTATTTCTTAACCAATCCAAGGTCTACTTTTGCAGATAATTATATTGTGTTGCTTTGTCTTGTGTACTGTGTGACCGGCATAGCATACGCACTGTCCATAGTTTTTGAACCTGGCGCGGCTCAGCTGTGGTCAGTACTTCTTCCTGTTGTTTTGACTCTCATTGCGACACAACCAAAAGATAGTAAAATTTTAAAGGCTATAGTTTAA 3105 0.4029 MCSWRLFLWFVLTLSFLFGKKMHCQDMNDYDQIDNPAVLPLITQLVYSRISNLTSILSHQISADSNFCVKDPDSDWNQAFNFSSNLGFLESCIKKTKGDISNRLCTAAEVKFYLNSLMEKSTSANYLKPNKNCNLTSWVSGCEPGWACRVPPSSQKIDLRDSKEMPSRTSNCRACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGVCEPYLYQLPPMKPNHTCGGANTWADFSSSSETFCSAGSYCPTTTQKFPCSSGHYCRTGSTSEKRCFKLSSCNSNTATQNMHAYGVMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAATSARKTANAHQRWKSAKDAAKKGASGLQAQLSRKFSRKKDDENLEKVKILNQEASETDVELLPHSQPSSMVASSSAAAAPTEKGKNPSGLMHIMHEIENDPHVNDNPNTERESRHKSVTKEKQPHTNTQIFKYAYAQLEKEKAQQQQNKNLTFSGVLKMATNTEKMKRPFIEISFKDLTLTLKSRNKHILRNVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAFGCLVNGSILINGTHESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGTVEKRGISGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHGSSKKVEEYFSGLGINVPERINPPDYYIDILEGIAAPDGNSGLRYEDLPIKWMLHNGYPIPLEMRQHAAQFDIPQSVNLANESDEVGKTFAGELWNDVRNNVELRGEKIRINFLKSKDLSGRKTPGVFKQYKYFLIRVGKQRLREARIQAVDYLILLLAGACLGSITKSSDQTFDASGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTMDHFNTVIKPVVYLSMFYFLTNPRSTFADNYIVLLCLVYCVTGIAYALSIVFEPGAAQLWSVLLPVVLTLIATQPKDSKILKAIV 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04751 1034 Gene3D - 500 737 IPR027417 -
Trre2g04751 1034 MobiDBLite consensus disorder prediction 424 451 - -
Trre2g04751 1034 SMART AAA_5 528 720 IPR003593 GO:0016887
Trre2g04751 1034 MobiDBLite consensus disorder prediction 325 369 - -
Trre2g04751 1034 Pfam ABC-2 type transporter 700 1033 IPR043926 GO:0140359
Trre2g04751 1034 Pfam ABC transporter 519 671 IPR003439 GO:0005524
Trre2g04751 1034 CDD ABCG_EPDR 500 726 - -
Trre2g04751 1034 MobiDBLite consensus disorder prediction 387 410 - -
Trre2g04751 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 724 IPR027417 -
Trre2g04751 1034 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 245 1022 - -
Trre2g04751 1034 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 743 IPR003439 GO:0005524
Trre2g04751 1034 MobiDBLite consensus disorder prediction 385 455 - -
Trre2g04751 1034 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524|GO:0016887
Trre2g04751 1034 FunFam ABC transporter G family member 24 496 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04751 Trre-Chr2 55115439 55121463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04751 502 721 Calmodulin-binding Proteins AT2G36910 26.556 7.72e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04751 - - gmx:100775464 1686.39