Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04736 ATGAATAACTCAGTAGTTTCAGAAAACAGTTTTATTATTGAAAGTGATGAAGAAGATGATAAGGATTTTAACAAAGGTGATGATGGAAATGATTCTGATTCTTCAAATTACTCCAATGAAAATCCACCACAAAGGGTACAAAGTTCTTACAACCCTTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTACCATCACCAAATATTGGATTTCTAGGAACTTCTTCATTGTCAAGATTAAGCAGTTCCTTCCTTTCAACATCTTTAACAAGGAGGCACACTCCTGAAGCTCTTCCTTCGGTTACAAAACCTTTGATACAGACAGTAGAAGATGAGCCGCCACACAAACGCAGCTCTCACGCTTTGCTTCCTCCCCTTTCTAGAAGGTCTTCTTTGCTTAAGAAAGAATCCAAGGTCTGTCATGAAGTTCCTTCTCGACACTGCTCTTACGGACAGGCTGTGCTTAATGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCTAAAGAAGGTGGATGGGTTGGACTTTCCATTTTGTTCATTTTTGGAATCATTTCCTTTTATACTGGATTGCTCTTGCGTTCGTGCTTGGACAGTGAACCTGGCCTTGAAACATACCCTGACATTGGCCAAGCTGCTTTTGGTACTACCGGACGTATCGCTATTTCAATAGTATTGTACGTTGAATTATATGGCTGTTGCATAGAATATATAATTTTGGAGGGAGACAATTTGGCGTCCTTGTTTCCAAACGCATACTTAAATTTAGTTGGAATTCAGTTGAGTCCACAAACGCTCTTTGCTATAGTTGCTGCCTTGGCTGTTCTTCCTACAGTTATGCTCCGTGACCTAAGCATTCTTAGTTACATCTCAGCTGGTGGAGTTATCGCATCAGTTTTAGTGGTTCTGTGCTTGCTATGGATCGGTGTAGAAGATGTTGGCTTTCAACGCTCAGGGACAACACTCAATCTTGCAACTCTTCCTGTAGCTATTGGTCTTTACGGTTACTGTTATTCTGGACATGCCGTGTTCCCAAATATTTATACTTCCATGGCAAATCCAAACCAATTCCCTGCTGTACTAGTAGCATGTTTTGGAGTTTGTACCTTACTATATGCTGGCGGTGCTTTTATGGGATACAAAATGTTTGGAGACGATACTCTCTCTCAATTCACTCTTAACCTGCCACAAGATTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATATGCATACATAGAGATGGAAAAAAATTATTCATCTTAA 1323 0.4021 MNNSVVSENSFIIESDEEDDKDFNKGDDGNDSDSSNYSNENPPQRVQSSYNPSWPQSYRQSIDLYSSVPSPNIGFLGTSSLSRLSSSFLSTSLTRRHTPEALPSVTKPLIQTVEDEPPHKRSSHALLPPLSRRSSLLKKESKVCHEVPSRHCSYGQAVLNGINVLCGVGILSTPYAAKEGGWVGLSILFIFGIISFYTGLLLRSCLDSEPGLETYPDIGQAAFGTTGRIAISIVLYVELYGCCIEYIILEGDNLASLFPNAYLNLVGIQLSPQTLFAIVAALAVLPTVMLRDLSILSYISAGGVIASVLVVLCLLWIGVEDVGFQRSGTTLNLATLPVAIGLYGYCYSGHAVFPNIYTSMANPNQFPAVLVACFGVCTLLYAGGAFMGYKMFGDDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYPLYAYIEMEKNYSS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04736 440 PANTHER OS05G0424000 PROTEIN-RELATED 161 433 - -
Trre2g04736 440 MobiDBLite consensus disorder prediction 30 54 - -
Trre2g04736 440 MobiDBLite consensus disorder prediction 1 54 - -
Trre2g04736 440 Pfam Transmembrane amino acid transporter protein 153 431 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04736 Trre-Chr2 55070703 55073595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04736 3 428 Amino Acid or Auxin Permease AAAP Family AT2G39130 70.872 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04736 K15015 - gmx:100775840 650.973