Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g04709 | ATGCAATTTCAAGCAGAGGCCAAACTTTTTGCTGTAGTTCATCATAAATACTTGACTGGTCTTATAGGGTACTGTGATGATACCAACATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCCAAACACTTATCAGATAAAAGTGAACATATATTGATTTTGATTCAACGACTTCAAATTGCGGTGGATGCTGCAGAAGGTTACTTCTACAAGAACTTTACTAAGGGGGAGCAATTTGTGGTTGCACTCCTCAGTTTGTTTAGCTTAAGTTAG | 279 | 0.3799 | MQFQAEAKLFAVVHHKYLTGLIGYCDDTNMALIYEYMANGDLAKHLSDKSEHILILIQRLQIAVDAAEGYFYKNFTKGEQFVVALLSLFSLS | 92 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g04709 | 92 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 72 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g04709 | 92 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 72 | - | - | |
Trre2g04709 | 92 | PANTHER | OS07G0107800 PROTEIN-RELATED | 2 | 69 | - | - | |
Trre2g04709 | 92 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 71 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g04709 | Trre-Chr2 | 54718225 | 54719245 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g04709 | 2 | 72 | Receptor kinase-like Gene Family | AT1G51860 | 54.795 | 1.39e-20 | 82.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Trre2g04709 | PK_Tyr_Ser-Thr | 1.5e-09 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g04709 | - | - | mtr:11427151 | 119.012 |