Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04709 ATGCAATTTCAAGCAGAGGCCAAACTTTTTGCTGTAGTTCATCATAAATACTTGACTGGTCTTATAGGGTACTGTGATGATACCAACATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCCAAACACTTATCAGATAAAAGTGAACATATATTGATTTTGATTCAACGACTTCAAATTGCGGTGGATGCTGCAGAAGGTTACTTCTACAAGAACTTTACTAAGGGGGAGCAATTTGTGGTTGCACTCCTCAGTTTGTTTAGCTTAAGTTAG 279 0.3799 MQFQAEAKLFAVVHHKYLTGLIGYCDDTNMALIYEYMANGDLAKHLSDKSEHILILIQRLQIAVDAAEGYFYKNFTKGEQFVVALLSLFSLS 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04709 92 Pfam Protein tyrosine and serine/threonine kinase 2 72 IPR001245 GO:0004672|GO:0006468
Trre2g04709 92 Gene3D Transferase(Phosphotransferase) domain 1 1 72 - -
Trre2g04709 92 PANTHER OS07G0107800 PROTEIN-RELATED 2 69 - -
Trre2g04709 92 SUPERFAMILY Protein kinase-like (PK-like) 2 71 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04709 Trre-Chr2 54718225 54719245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04709 2 72 Receptor kinase-like Gene Family AT1G51860 54.795 1.39e-20 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre2g04709 PK_Tyr_Ser-Thr 1.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04709 - - mtr:11427151 119.012