Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04701 ATGCCCCCTGAGCAAGAAACAACTATTAATGCACCAAATAGCATTTCACCTAACACAAACAGAACTGAGAACATCTCCATCCATGGTGACCCAGAAGGTTCTTCTTCTTCTAATAAAGTTAAACCCAGTTTGGATATTGATCATAACGCCATTAATATTCCTTCTCATCCACCTACACCAATAACATCATTTTCCATTCTTCCTCAATCCTTGCGTCCAATTACCATCAAATTTGAAGATGTTTCATACAGCTTAACCTTAACAAACCAAAAGAAGAACAACGGTTGCGTTTTGGGAAAAGAATCAAAAGTAACAAGAAAAATACTCAACGGAGTCACCGGAATAGCAAAACCCGGCGAGTTAACGGCAATGCTGGGTCCATCAGGAAGTGGAAAAACCACCCTACTAACCGCCTTAGCCGGAAGACTAACCGGAAAAGTCACCGGAACAATAACATACAACGGAAACTCGGACTCATCTTGCATTAAACGCAAAATAGGTTTTGTTTCTCAAGACGACGTCGTTTACCCTCACTTAACAGTTTTAGAAACATTAACCTACACTGCTCTATTAAGACTTCCCAAAACACTCACCAGAGGAGAGAAAATCGAACACGCAGAGAGGATAATTACGGAATTAGGCCTCACGCATTGTCGAAATTCTCCCGTTGGTGGGTGTATGGGACTTTTCCGGGGAATCTCCGGTGGAGAAAGGAAAAGGATGAGTATTGGACAAGAAATGTTGGTGAACCCGAGTTTATTGTTGTTGGATGAACCGACTTCCGGTTTGGACTCGACCACGGCTCAACTTATTGTTTCGGTTCTTAAGGGATTGGCTCGGTCCGGTCGAACCGTTGTCACTACTATTCATCAACCTTCGAGCCGGTTGTATAGGATGTTTGATAAAGTTGTGGTTTTGTCTGATGGGTACCCGATTTATAGTGGTAATGCGGGTCGGGTTATGGATTATCTTGGATCTGTTGGGTTTGTTCCGGGTTTTAACTTTGTTAATCCTGCTGATTTTCTCCTTGACCTTGCTAATGGCATAGTTGCTGATGTGAAACATAATGATGATGAGATAGAGAAGCATGATCAAGATCAAGCTTCAGTGAAACAGTCACTAATTTCATCCTATAAGAAAAACTTATACCCTGCTCTTAAAGAAGATATTCAGCAAAATAACACTGAACCACTTGTTTTTCCATCAAGAGGAACATCAAGACGTTGTTCTGAAAACCAATGGAACACTAGCTGGTGGGAACAATTCAAGGTTCTGCTTAAGAGGGGTTTACAAGAAAGGAGACATGAATCTTTTTCTGGCTTAAAGATTTTCCAAGTCTTGTCTGTATCCATTCTTTCTGGACTCCTTTGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTAGGACTACTATTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTCTTTAATGCAATCTTTGCATTTCCATTGGATAGACCAATGCTAAAAAAAGAAAGATCATCAGGCATGTACCATCTCTCCTCCTACTATGTTGCTAGGATGGTAGGAGACTTACCAATGGAGCTTGTTCTTCCTACAATCTTTGTAACTATAACCTATTGGATGGGTGGTCTTAAACCTTCTTTGGTTACCTTTGTGTTAACCCTTTTGATCATGCTTTTCAATGTTCTAGTCTCTCAAGGAATAGGCCTAGCACTTGGTGCAATTCTAATGGATGTTAAACAAGCCACAACTCTAGCTTCAGTGACAATGTTGGTTTTTCTTTTAGCTGGTGGATACTACATTCAGAAAATGCCTTCTTTTATAGCTTGGCTTAAGTACTTTTCTTTCAGTCATTACTGTTATAAGTTGCTTGTAGGGGTGCAGTATTCAGTAAATGAGGTGTATGAGTGTGGACAAGGGTTGCATTGTAGGGTAAGAGATTTTCCAGCCATTAAGTGTTTGGAGATTGGTAATATGTGGGGAGATGTGGCTGCATTGACTGTAATGTTTGTTGGATACAGAGTTGTTGCATATTTAGCTTTGAGGATTGGACAGCCGAAATGCCTAAGGACTTAA 2067 0.4083 MPPEQETTINAPNSISPNTNRTENISIHGDPEGSSSSNKVKPSLDIDHNAINIPSHPPTPITSFSILPQSLRPITIKFEDVSYSLTLTNQKKNNGCVLGKESKVTRKILNGVTGIAKPGELTAMLGPSGSGKTTLLTALAGRLTGKVTGTITYNGNSDSSCIKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTRGEKIEHAERIITELGLTHCRNSPVGGCMGLFRGISGGERKRMSIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLKGLARSGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGNAGRVMDYLGSVGFVPGFNFVNPADFLLDLANGIVADVKHNDDEIEKHDQDQASVKQSLISSYKKNLYPALKEDIQQNNTEPLVFPSRGTSRRCSENQWNTSWWEQFKVLLKRGLQERRHESFSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLKKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYKLLVGVQYSVNEVYECGQGLHCRVRDFPAIKCLEIGNMWGDVAALTVMFVGYRVVAYLALRIGQPKCLRT 688
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04701 688 FunFam ABC transporter G family member 22 96 327 - -
Trre2g04701 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 333 IPR003439 GO:0005524
Trre2g04701 688 MobiDBLite consensus disorder prediction 1 43 - -
Trre2g04701 688 Pfam ABC-2 type transporter 290 357 IPR043926 GO:0140359
Trre2g04701 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 327 IPR027417 -
Trre2g04701 688 Pfam ABC-2 type transporter 420 626 IPR013525 GO:0016020|GO:0140359
Trre2g04701 688 Pfam ABC transporter 110 261 IPR003439 GO:0005524
Trre2g04701 688 ProSitePatterns ABC transporters family signature. 233 247 IPR017871 GO:0005524|GO:0016887
Trre2g04701 688 CDD ABCG_EPDR 73 315 - -
Trre2g04701 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 35 675 - -
Trre2g04701 688 Gene3D - 72 327 IPR027417 -
Trre2g04701 688 SMART AAA_5 118 311 IPR003593 GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre2g04701 Trre-Chr2 54633658 54638095 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04701 107 309 Calmodulin-binding Proteins AT2G36910 30.986 1.14e-13 73.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04701 K05681 - gmx:100783696 1081.24