Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04700 ATGATGCCCCCTGAGCAAGAAACAACTATTAATGCACCAAATAGCATTTCACCTAACACAAACAGAACTGAGAACATCTCCATCCATGGTGACCCAGAAGGTTCTTCTTCTTCTAATAAAGTTAAACCCAGTTTGGATATTGATCATAACGCCATTAATATTCCTTCTCATCCACCTACACCAATAACATCATTTTCCATTCTTCCTCAATCCTTGCGTCCAATTACCATCAAATTTGAAGATGTTTCATACAGCTTAACCTTAACAAACCAAAAGAAGAACAACGGTTGCGTTTTGGGAAAAGAATCAAAAGTAACAAGAAAAATACTCAACGGAGTCACCGGAATAGCAAAACCCGGCGAGTTAACGGCAATGCTGGGTCCATCAGGAAGTGGAAAAACCACCCTACTAACCGCCTTAGCCGGAAGACTAACCGGAAAAGTCACCGGAACAATAACATACAACGGAAACTCGGACTCATCTTGCATTAAACGCAAAATAGGTTTTGTTTCTCAAGACGACGTCGTTTACCCTCACTTAACAGTTTTAGAAACATTAACCTACACTGCTCTATTAAGACTTCCCAAAACACTCACCAGAGGAGAGAAAATCGAACACGCAGAGAGGATAATTACGGAATTAGGCCTCACGCATTGTCGAAATTCTCCCGTTGGTGGGTGTATGGGACTTTTCCGGGGAATCTCCGGTGGAGAAAGGAAAAGGATGAGTATTGGACAAGAAATGTTGGTGAACCCGAGTTTATTGTTGTTGGATGAACCGACTTCCGGTTTGGACTCGACCACGGCTCAACTTATTGTTTCGGTTCTTAAGGGATTGGCTCGGTCCGGTCGAACCGTTGTCACTACTATTCATCAACCTTCGAGCCGGTTGTATAGGATGTTTGATAAAGTTGTGGTTTTGTCTGATGGGTACCCGATTTATAGTGGTAATGCGGGTCGGGTTATGGATTATCTTGGATCTGTTGGGTTTGTTCCGGGTTTTAACTTTGTTAATCCTGCTGATTTTCTCCTTGACCTTGCTAATGGCATAGTTGCTGATGTGAAACATAATGATGATGAGATAGAGAAGCATGATCAAGATCAAGCTTCAGTGAAACAGTCACTAATTTCATCCTATAAGAAAAACTTATACCCTGCTCTTAAAGAAGATATTCAGCAAAATAACACTGAACCACTTGTTTTTCCATCAAGAGGAACATCAAGACGTTGTTCTGAAAACCAATGGAACACTAGCTGGTGGGAACAATTCAAGGTTCTGCTTAAGAGGGGTTTACAAGAAAGGAGACATGAATCTTTTTCTGGCTTAAAGATTTTCCAAGTCTTGTCTGTATCCATTCTTTCTGGACTCCTTTGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTAGGACTACTATTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTCTTTAATGCAATCTTTGCATTTCCATTGGATAGACCAATGCTAAAAAAAGAAAGATCATCAGGCATGTACCATCTCTCCTCCTACTATGTTGCTAGGATGGTAGGAGACTTACCAATGGAGCTTGTTCTTCCTACAATCTTTGTAACTATAACCTATTGGATGGGTGGTCTTAAACCTTCTTTGGTTACCTTTGTGTTAACCCTTTTGATCATGCTTTTCAATGTTCTAGTCTCTCAAGGAATAGGCCTAGCACTTGGTGCAATTCTAATGGATGTTAAACAAGCCACAACTCTAGCTTCAGTGACAATGTTGGTTTTTCTTTTAGCTGGTGGATACTACATTCAGAAAATGCCTTCTTTTATAGCTTGGCTTAAGTACTTTTCTTTCAGTCATTACTGTTATAAGTTGCTTGTAGGGGTGCAGTATTCAGTAAATGAGGTGTATGAGTGTGGACAAGGGTTGCATTGTAGGGTAAGAGATTTTCCAGCCATTAAGTGTTTGGAGATTGGTAATATGTGGGGAGATGTGGCTGCATTGACTGTAATGTTTGTTGGATACAGAGTTGTTGCATATTTAGCTTTGAGGATTGGACAGCCGAAATGCCTAAGGACTTAA 2070 0.4082 MMPPEQETTINAPNSISPNTNRTENISIHGDPEGSSSSNKVKPSLDIDHNAINIPSHPPTPITSFSILPQSLRPITIKFEDVSYSLTLTNQKKNNGCVLGKESKVTRKILNGVTGIAKPGELTAMLGPSGSGKTTLLTALAGRLTGKVTGTITYNGNSDSSCIKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTRGEKIEHAERIITELGLTHCRNSPVGGCMGLFRGISGGERKRMSIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLKGLARSGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGNAGRVMDYLGSVGFVPGFNFVNPADFLLDLANGIVADVKHNDDEIEKHDQDQASVKQSLISSYKKNLYPALKEDIQQNNTEPLVFPSRGTSRRCSENQWNTSWWEQFKVLLKRGLQERRHESFSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLKKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYKLLVGVQYSVNEVYECGQGLHCRVRDFPAIKCLEIGNMWGDVAALTVMFVGYRVVAYLALRIGQPKCLRT 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04700 689 Pfam ABC transporter 111 262 IPR003439 GO:0005524
Trre2g04700 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 35 676 - -
Trre2g04700 689 MobiDBLite consensus disorder prediction 7 44 - -
Trre2g04700 689 ProSitePatterns ABC transporters family signature. 234 248 IPR017871 GO:0005524|GO:0016887
Trre2g04700 689 SMART AAA_5 119 312 IPR003593 GO:0016887
Trre2g04700 689 MobiDBLite consensus disorder prediction 1 44 - -
Trre2g04700 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 328 IPR027417 -
Trre2g04700 689 Pfam ABC-2 type transporter 291 358 IPR043926 GO:0140359
Trre2g04700 689 FunFam ABC transporter G family member 22 97 328 - -
Trre2g04700 689 Pfam ABC-2 type transporter 421 627 IPR013525 GO:0016020|GO:0140359
Trre2g04700 689 Gene3D - 73 328 IPR027417 -
Trre2g04700 689 CDD ABCG_EPDR 74 316 - -
Trre2g04700 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 334 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04700 Trre-Chr2 54633655 54638095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04700 108 310 Calmodulin-binding Proteins AT2G36910 30.986 1.17e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04700 K05681 - gmx:100783696 1083.17