Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04653 ATGGAATTTATAACTTGTGCATTACTCCTTCTCTTGACATGTACCACACTTCATTTCCTTAGTAGAATCATAAAACCGAACCATAATCTTCCGCCGGGCCCAACCCGTTTTCCGATCATCGGAAACCTCCTTGAACTTGGAGAAAAACCACACCAATCATTAGCCAAACTAGCAAAAATTCATGGTCCAATAATGAGCCTCAAACTAGGAAGAATAACAACTATAGTAATTTCTTCAGCTGAAATGGCAAAAGAAGTGCTATTAACTCATGACCAATTCTTGTCAAATAGAACAATTCCTCAATCTGTTTCTGTTCTTAACCATGAACATTTTAGCCTTGCTTTCATACCCGTTTCGCCACTTTGGCGCGAATTGAGAAAAATATGCAATGGTCAATTATTTGCACATAAGACTCTTGATGAAAGCCAAGATGTAAGGCGCAATAAAGTTCACCAACTTCTTCATGATGTGCACAAAAGTAGCCAAATTGGTGAAGCAATAGACATTGGAAATGAAGTATTCAAAACAACGATAAATTTATTATCGAACACTATTTTCTCCGAAGATTTGATTCAATCTACCGGGACAGCAGGAGAGTTTAAAGACTTGGTTACAAACATCACAAAATTAGTTGGATCACCAAACATAGCTGATTTTTTCCCATTGCTTAAGGTCATTGATCCTCAAGGTGTGAAAAGACAACAAACTAAGAATGTTGCTAAGGTGTTGGATGTCTTCGATCGATTGATTCGGAAACGTTTGAAGTTGAGGGAAAGTGAAGATTCTAACACACACAATGACATGTTAGATGCCCTTCTGAATATTTCTAAAGAAAATGAGATGATGGACAAAAACATGATTGAACATTTGGCACATGATCTTTTTGTTGCGGGAACGGACACAACAACTTCAACACTTGAATGGGCAATGACGGAATTAGTCCTCAACTTAGAGATCATGTCAAAAGCAAAAAAGGAGCTAGAAGAAGTGGTAGGCAAAGGTAAACCTATTGAAGAATCGGATATTGCAAGTCTTCCGTACTTGCAAGCAATCATAAATGAGACATTTCGATTGCACCCTCCAGTTCCTCTTTTGCTCCCTCGAAAAGCAGCAAAAGACGTGGAGCTATGTGGCTTCACCATTCCAAAAGATGCGCAAGTGTTTATTAATGTGTGGACTATTGGTAGGGACCAAAATTTATGGGACAATCCAACTTTGTTCTCACCCGAAAGATTTCTTGGGTCAGATATCGATGTAAAGGGTAGGAATTTCGAGCTTGCGCCATTCGGTGCTGGAAGAAGAATATGCCCCGGTATGATGTTAGCTTTAAGGATGTTGCTTTTGATGTTAGGTTCATTGATTAACTCCTTTGATTGGAAGCTTGAAGATGACATGAAACCAGAAGATATGAACATGGAAGAAAAATTTGGAATTACCTTGCAAAAGGCACAACCTCTTCGAGTTGTTCCTGTTAAGATTAGCAATTAA 1488 0.3851 MEFITCALLLLLTCTTLHFLSRIIKPNHNLPPGPTRFPIIGNLLELGEKPHQSLAKLAKIHGPIMSLKLGRITTIVISSAEMAKEVLLTHDQFLSNRTIPQSVSVLNHEHFSLAFIPVSPLWRELRKICNGQLFAHKTLDESQDVRRNKVHQLLHDVHKSSQIGEAIDIGNEVFKTTINLLSNTIFSEDLIQSTGTAGEFKDLVTNITKLVGSPNIADFFPLLKVIDPQGVKRQQTKNVAKVLDVFDRLIRKRLKLRESEDSNTHNDMLDALLNISKENEMMDKNMIEHLAHDLFVAGTDTTTSTLEWAMTELVLNLEIMSKAKKELEEVVGKGKPIEESDIASLPYLQAIINETFRLHPPVPLLLPRKAAKDVELCGFTIPKDAQVFINVWTIGRDQNLWDNPTLFSPERFLGSDIDVKGRNFELAPFGAGRRICPGMMLALRMLLLMLGSLINSFDWKLEDDMKPEDMNMEEKFGITLQKAQPLRVVPVKISN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04653 495 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 Coils Coil 310 330 - -
Trre2g04653 495 FunFam Cytochrome P450 76C4 23 489 - -
Trre2g04653 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 492 - -
Trre2g04653 495 CDD CYP76-like 58 490 - -
Trre2g04653 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 Pfam Cytochrome P450 31 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Trre2g04653 495 SUPERFAMILY Cytochrome P450 31 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04653 495 Gene3D Cytochrome P450 22 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04653 Trre-Chr2 54052796 54054519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04653 1 492 Cytochrome P450 AT2G45550 44.466 1.15e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04653 - K23810 gmx:100798291 805.053