Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04599 ATGGATTATGTTAGCAGCGCAATGATCCTTTTGGTGACATGCATTGTCACATACTTTATTGGTTCACTTTATGCAAGAAGCAAAAATTCAAATTACAAGCTTCCACCAGGACCTTCCATTTTCACTATTATGTCACATGTTTTTGAATTATATTACAAGCCACAACAAACACTTGCAAAATTTGCTAAGTTTTATGGTCCTGTTATGCTTATTAAGTTATGCACTGAGACCACTGTGATTATTTCATCATCAGATATGGCCAAAGAAATTCTTCATACTAATGATTCTTTGTTCACTGATAGATCTGTTCCTCATAACACAACAACTCACAATCACAACAATTTTAGTTTAGTCTTTCTACCATTTTCACCTCTTTGGCAACACCTTAGAAAAATATGTCATAATAGTCTATTCTCTAATAAGACTCTTGATGGAAGTACAGAACTTAGACGTATGAAATTGAAAGATCTTCTAAATGATATGCATAAAAGCAGCTTAATTGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTTAAGGCATGCATTAATTTTTTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAATCTTTAGATGATGAATATAAGGATATAGTTTCCACTCTATTGAGTGCTGTTGGAACACCAAACATTGCTGATCATTTTCCTATATTGAAGATTCTTGACCCACAAGGCATTAAAAGACACACTACTAAATATGTTGCAAAAGTGTTCTATGCATTAGATATCATAATTGACAAAAGAATGAAGCTAAGACAAAGTGAAGATTATGTCTCAAAGAATGACATGTTAGACACCTTGTTGGACATTTCCAAAGAAGATAGCCAAAAGATGGATAAAAAACAGATTAAACATCTATTACTTGATCTGCTTGTGGCTGGAACAGAAACGTCAGCATATGGATTAGAAAGGGCAATGACTCGTCTAGTACACGATCCAAAGGCTATGTCAAAAGCAAAAAGGGAACTTGAGGAAACTATTGGAATTGGGAATCCAATTGAGGAATCCGACATTCCTAGGCTTCCATATTTACAAGCAGTGATAAAAGAGAGTTTGCGATTACACCCTCCAGCACCACTTTTGCTTCCTCGAAAAGCAAGAGTAGATGTGGAAATATCAGGTTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGAAATATGGGATGATGCTCATTTGTTCTCACCGGAAAGATTTTTGGGATCTGAAATTGATGTCAAAGGTCGACACTTTAATCTTACACCATTTGGTAGCGGAAGACGTATATGTCCCGGCTCACCATTAGCTGTTAGGATGTTGCATTTGATGTTGGGATCGTTAATCAACTCCTTTGATTGGAAACTTGAAAATAATCTGGAGCCTAAGGACATGAACATGGACAAATCCCTAAGAGCTATTCCAGTTATGCTAAACAACATTAAGTAA 1470 0.3578 MDYVSSAMILLVTCIVTYFIGSLYARSKNSNYKLPPGPSIFTIMSHVFELYYKPQQTLAKFAKFYGPVMLIKLCTETTVIISSSDMAKEILHTNDSLFTDRSVPHNTTTHNHNNFSLVFLPFSPLWQHLRKICHNSLFSNKTLDGSTELRRMKLKDLLNDMHKSSLIGEAVDVGRAAFKACINFLSYTFVSQDFVESLDDEYKDIVSTLLSAVGTPNIADHFPILKILDPQGIKRHTTKYVAKVFYALDIIIDKRMKLRQSEDYVSKNDMLDTLLDISKEDSQKMDKKQIKHLLLDLLVAGTETSAYGLERAMTRLVHDPKAMSKAKRELEETIGIGNPIEESDIPRLPYLQAVIKESLRLHPPAPLLLPRKARVDVEISGYTIPKGAQVLINEWAIGRTEIWDDAHLFSPERFLGSEIDVKGRHFNLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNLEPKDMNMDKSLRAIPVMLNNIK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04599 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre2g04599 489 Gene3D Cytochrome P450 22 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 Pfam Cytochrome P450 35 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 SUPERFAMILY Cytochrome P450 35 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 477 - -
Trre2g04599 489 FunFam Cytochrome P450 76C4 26 489 - -
Trre2g04599 489 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04599 489 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04599 Trre-Chr2 53460040 53462326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04599 1 488 Cytochrome P450 AT2G45550 39.412 3.07e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04599 - - gmx:100800810 658.677