Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04564 ATGACTAGAAGGAAAGTGAAAATTGCGTTTATCTCTGATGATTCAACAAGGAGGGCAACCTACAACAGAAGAAAAAAAGAGTTCTGGCCAAATCAAGAGGGAGCTAAGGAGGTGATTGAAAGATATCAAAATTCATCTGTGAAAGATGCAACAAAGAATGTTAACCAACAGAGTTTGATTTTGCAAATGATTACTAAAGGTCAGGAGAAGCTAAGGAAATTGGAACAAAGCAATCATGAGAAGGAGCTGACTCTGCGTATGTTTGAGTATATGCAGCACAAAAATCTGCCAGACAATCTGACTGTCGAAGAACTGAAAGATTTTGATAAGCTCATTAAGAAGAATATGAAAGATTTTGATGATGCCAAGATCAATAAACTTAATTGA 387 0.3592 MTRRKVKIAFISDDSTRRATYNRRKKEFWPNQEGAKEVIERYQNSSVKDATKNVNQQSLILQMITKGQEKLRKLEQSNHEKELTLRMFEYMQHKNLPDNLTVEELKDFDKLIKKNMKDFDDAKINKLN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04564 128 SUPERFAMILY SRF-like 1 53 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04564 Trre-Chr2 52989292 52989765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04564 1 120 MADS-box Gene Family AT5G26630 31.333 3.06e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04564 - - mtr:11436886 140.584