Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04524 ATGGGAATAGCAATGGGTGGTACTGATTTTTTGAGTGAAAAAGCAGCTTTGATGAGAGAGTCTCTTCAAAAAAGCCAAACAATCACAGACAACGTTGTCACCATTCTTGGTTCCTTTGACCACCGTCTTTCTGCCCTTGAAACCGCCATGCGTCCAACTCAGATTAGGACTTATTCTATTAGAAAAGCTCATGAGAATATTGATAAGACTTTGAAGGCTGCAGAGATTATATTGTCTCACTTTGATCAGTATCGTCAGGCAGAGGCCAAAATACTCAAAGGGCCGCACGAAGACCTGGAAAACTATCTTGAAGCAATTGCTAAGTTGAGAAGCAACATTCAGTTTTTTGGCAGTAAGAGCAGTTTTAAGAATAGTGATGGTGTTGTTAGCCATGCCAGTAGTTTGCTAAATAAAGCTATTTCTAAGTTACAGGACGAGTTTAATCAGCTATTATTATCTTACAGCAAACCTGTGGAACCCGAGCGCCTCTTTGATTGCCTTCCAAACTCAATGCGACCTTCGTCAGGATCACCTGGTCATGAGGGTGATCATAATGGCAAATCCAATCATCATTCTGAGTCTCACAACAATAATGCTGATGCTGTTGTCTACACACCTCCCGCTCTTATACCACCAAGAATTTTGCCACTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCACCGACCACAGTTACTCACAATGTACAGGGAAGCCCGTTCTAATGTATTGGAAGAAAGCCTCCAAAAACTTGGTGTTGAGAAACTCAACAAAGACGATGTTCAAAAACTGCAATGGGAGATTTTGGAGGCCAAAATCGGAAACTGGATTCATTTCATGCGAATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTTGCTGAACAGTGTTTTGCCGAGGTGACAACAAATAGTGTGTCTATGCTACTTAGCTTTGGAGAAGCAATAGCCAAAAGCAAGAGATCCCCAGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTGCATTCAGAGATTGAAACACTTTTTAAAGGCAAAGCTTGTGCTGCCATAAGAGACGCTGCGATGGCTTTGACAAAACGACTTGCACAAACTGCGCAGGAGACCTTTGGAGATTTTGAAGAAGCGGTTGAAAAAGACGCTACAAAAACTGCAGTAACAGATGGAACTGTTCATCCTTTGACTAGCTATGTTATTAACTATGTCAAGTTTTTGTTTGACTACCGATCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGTGGAAATGATTCTTCCCAGCTAGCTACTGTAACAATGCGAATAATGCAAGCTTTACAAATCAATCTAGATGGAAAATCAAAGCAGTATAAAGACCCTGCACTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTGCTTGGTGATGATTGGGTACAAAGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCTTATCTATTCAGGGACTTGCCTCATCAGGCGGTGGGAGTAGTAATGCTGGTGGTGATGGCGGAGCTGGAAGTAGTAGTGGCGCTTCAAGAGCACTTGTTAAAGAAAGGTTTAAGCAATTCAATATCATGTTTGAGGAACTCCATCAGAAACAATCACAATGGACAGTTCCAGACAGCGAGTTGCGAGAATCTCTGCGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTCGTGAAACGTTTTGGGCCTCTAGTGGAGAGTGGAAAGAATCCGCAAAAGTACATAAAATACACTGCAGAAGATCTAGATCGAATGTTGGGCGAATTTTTTGAAGGGAAAAACATGAATGAAACCAAACGGTAA 1956 0.4121 MGIAMGGTDFLSEKAALMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTYSIRKAHENIDKTLKAAEIILSHFDQYRQAEAKILKGPHEDLENYLEAIAKLRSNIQFFGSKSSFKNSDGVVSHASSLLNKAISKLQDEFNQLLLSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDHNGKSNHHSESHNNNADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRPQLLTMYREARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLAEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACAAIRDAAMALTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGNDSSQLATVTMRIMQALQINLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLASSGGGSSNAGGDGGAGSSSGASRALVKERFKQFNIMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYTAEDLDRMLGEFFEGKNMNETKR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04524 651 MobiDBLite consensus disorder prediction 165 198 - -
Trre2g04524 651 SUPERFAMILY Cullin repeat-like 77 642 IPR016159 -
Trre2g04524 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 643 IPR004140 GO:0000145|GO:0006887
Trre2g04524 651 Pfam Exo70 exocyst complex subunit 277 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre2g04524 651 Gene3D Exocyst complex component Exo70 75 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04524 Trre-Chr2 52613366 52618869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04524 9 651 EXO70 exocyst subunit family AT5G03540 74.627 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04524 K07195 - gmx:100813987 1128.24