Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04487 ATGCCAGGCTTTCCTGTCGCGGCTGGTGAACCATGTAATTTTATAAGCACAGATCAACAACCTAGCCCTCTAGATGCTTCTGTGCAATTATCTGCCGAAGAGAAAGTTGTTGCAGAACAGAGTCTTTCAGTTTATTGCAAGCCTGTAGAGTTTTACAACTTTCTTTATCACCGTATTCTGCAACGTACTCCATCTTTCATTCCGAGATGTTTAGAGTACAGGAGAGAGGCTAGGAGAGAGAAAAGGACACAAATGACAGTTATGCTGTCATGGAATGATGAAGAAACTCAAAATGTGTGTCCTTTGTATATCGGTCTGGCAAGGCGTGATCCTAATAATGAAGATGCTGATTATTCTGCTGTTTATCTACTCAGTCAGATATATACCTTTCGAGGTTCCTCTGGCATTGACGGGAACTATAAAATCAGAGCAGAGTTTGTGCTCTTGGAAGTTAATGAGTTAGCAGCGGACGGCTCACTTTTTCTCTTGTTTTTCACCACTGAGGGAAATTCAAATTCATCATCTAGAGTCAATGCAAGTCTGGGGCCTTATGATCCGACTTCTCATGAATCAATAGCTGAAAAGATCTGCTTATACGAGAAAATTTCTTTTCAATCAATTTATATGGCTTGGGATAGTTCTCCAAGCTTCCGTTGGGGACAACGAGCTGAGATTACGACTACTCTTGATCTGCTTCCATGTATTTTGAAGTATGATGTTCTAAATAAGGGCACAACCATCGCAATCCAAGATCTCCGGAATTCTGAGATTGTGAGTACATCAAAGAATGTTCAAATCAAAATCTTTGCTGAAGAGTTCAGGGGCATGGAGAAATCTGTCAACTATACAAATGTCAGGGTTAATGTACCATCATCACCGTCGTCGTCATCCGCATCTTGTCTGATTCGGTTGAAAGAAGGAAAAGTGAAATTTAATTACAGGTATTTCAATAACAAATTGCAGAGAACAGAAGTCACTGAAGATTTCTCTTGTCCATTCTGTTATTTAAGATGTGCAAGCTATAAGGGTTTAAGATGCCATCTGCTCGCATCACATGATCTTTTCAAGTATGAATTTTCGGCATCGGAACATTGTCTGGCTGTTAATGTGTCTTGGAATCATGATACCTGGAGAACTGAGATTATTGGAGATGATGTTGATCCAAGATTGCAAACTTTTTACCTCCGTTGCAAGCGATACAAACACACAAGTCCAGAAGTTGCATGTTTTGAAGAGTTCCAGGGTGCTGACTCACCGGCCTTAGCTAATAATGCCGACCCACCAGCCTTTGCTATGGATGTTGATCCACCGGTCTTTGCTATGGATGCAGACCCACCGGTCCTAACTATGGGTGCAGACCCGCCAGTTTTATTTAAGGGTACAGACCCACCGAACTTAGCTATTGATGCAGACCCACCGGTCTTAACTATGGGTGCAGACCCACCGGTCTTAGCTAAGGATACAGACCCACCGAACTTAGCTATTGATGCAGACCCACCGGTCTTAACTATGGATGCAGACCCACCGGTCTTAGCTAAGGATACAGACCCACCGAACTTAGCTATTGATGCAGACCCACCGGTCTTAACTATGGATGCAGACCCACCGGTCTTAGCTAAGGATACAGACCTACCGAACTTAGCTATTGATGCGGACCCACCAGTCTTAGCTATTGATGCGGACCCACCGGTCTTAGCTATTGATGCAGACCCACCAATCTTATCTACTGATGCAGACCCACGGTTCTTAGCTATTGATGCGGACCCACTGGTCTTAGTTATGGATGCGGACCAACCGGTCTTAGCTATTGATGCGGACCCACCACTCTTAGCTACGGATGCAGACCCAACAATCTTAGCTAATGATGCAGACCCACCGGTCTTAGCTATTGATGTGGACCCAACGTCCATAGCTACGGATGCAGACCAACTATTCTTAGAGTCTGAAAATCCTTCAGGAGATATTGAGTTTTTGAAGAAGGCTGATGGAAATTCTGCAACTATATCAGGAGTTGCAAATGAAAATGTTGTATCCAATCCTGATCAAGATTTTGTCCCACCAATATCTGAGCATGACCATGCGACTCCTGCAGTGCCACAGGTTGACAATGCAGCGAAGTTAGACAAACAAAGCATAGCCCAGTTGCAGAAGCGAAAGTTTTATCATTCTCACAAAGCCCAGGAAATGTCACTTGAAGAAGTTCTATCAGATTATGATAGTGAGAATGAAGTTGATCCTGAAGTTGAAGACATTGAAGAGCGAAGGAGGCTTAATCTTCATGATGTTAGCAAAGAAGAGAAGGAATTCATGTTCATGTGGAACTCATTTATACGGAAGCAACGTGTGCTGGTAGATTCTCACATTCGTTGGGCATGTAAGGCTTTCTCAATATTGCATGGCACTGAGCTTGTTAAATCCCGTGAATTATCTTGGCATTGGAGAATGTTCAGGCTCAAATTATACAATTTTGGTCTTATAGATGGAAAGGTCATGAACGATTGCAGTATTATTCTCGAACAATACGAGAAGAATAAATCAAATCCTGAGATCCCAATCGCTAATATAAACTCCATTCTTTTGACCCCTCGTAAAAATAAAAGAAAGAAATGA 2610 0.4257 MPGFPVAAGEPCNFISTDQQPSPLDASVQLSAEEKVVAEQSLSVYCKPVEFYNFLYHRILQRTPSFIPRCLEYRREARREKRTQMTVMLSWNDEETQNVCPLYIGLARRDPNNEDADYSAVYLLSQIYTFRGSSGIDGNYKIRAEFVLLEVNELAADGSLFLLFFTTEGNSNSSSRVNASLGPYDPTSHESIAEKICLYEKISFQSIYMAWDSSPSFRWGQRAEITTTLDLLPCILKYDVLNKGTTIAIQDLRNSEIVSTSKNVQIKIFAEEFRGMEKSVNYTNVRVNVPSSPSSSSASCLIRLKEGKVKFNYRYFNNKLQRTEVTEDFSCPFCYLRCASYKGLRCHLLASHDLFKYEFSASEHCLAVNVSWNHDTWRTEIIGDDVDPRLQTFYLRCKRYKHTSPEVACFEEFQGADSPALANNADPPAFAMDVDPPVFAMDADPPVLTMGADPPVLFKGTDPPNLAIDADPPVLTMGADPPVLAKDTDPPNLAIDADPPVLTMDADPPVLAKDTDPPNLAIDADPPVLTMDADPPVLAKDTDLPNLAIDADPPVLAIDADPPVLAIDADPPILSTDADPRFLAIDADPLVLVMDADQPVLAIDADPPLLATDADPTILANDADPPVLAIDVDPTSIATDADQLFLESENPSGDIEFLKKADGNSATISGVANENVVSNPDQDFVPPISEHDHATPAVPQVDNAAKLDKQSIAQLQKRKFYHSHKAQEMSLEEVLSDYDSENEVDPEVEDIEERRRLNLHDVSKEEKEFMFMWNSFIRKQRVLVDSHIRWACKAFSILHGTELVKSRELSWHWRMFRLKLYNFGLIDGKVMNDCSIILEQYEKNKSNPEIPIANINSILLTPRKNKRKK 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04487 869 PANTHER POLYCOMB GROUP PROTEIN 29 847 - -
Trre2g04487 869 Pfam VEFS-Box of polycomb protein 707 836 IPR019135 -
Trre2g04487 869 CDD VEFS-box_EMF2-like 715 841 - -
Trre2g04487 869 CDD ZnB-Zn_EMF2-like 303 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04487 Trre-Chr2 52365182 52379222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04487 651 842 C2H2 Transcription Factor Family AT5G51230 45.596 8.54e-39 151