Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04483 ATGGAAGATACATTGCCTAAGATGGAAATCTTTACACAAAAGGAATTACCAACTTGTTTGCAAGAAATAGTAACAACAGAATCCAAGTATTTGGAAGATACAATTATAAGAAGAGACTCTTACTCTCTCACTTCTCCTTCATCAACACAAAATCTTTTCTGGTGTACTTCAAATTCTACTTCAATGAAACAAGAGGAACCATCCATGCTATACTCATCAACATCTCATATCAAAAGTAGTGAAATCATCTCAACAACTTCATATCCCACATATCCTATGTCACAATTTGGCCTAACTCAGCATCAACAAAACAATGGTTATGGATTTCATGATTCAAACAAAATGAATAAAAATATGATGGCAAACTTGCAATCCAAGTCTTTCAATGAGAATTGGTTGAGTACCACAAAGACTCAACCTATGAAGTATGGTGCAAGAGGGAAGCTTTTCAAAGGGGTGAGACAGAGACATTGGGGGAAATGGGTTGCTGAAATTAGGCTACCAAGAAACAGGACTAGAGTTTGGTTAGGAACATTCGACACAGCTGAAGATGCTGCAATTGCCTATGATACAGCAGCATATATACTAAGAGGTGAATGTGCTCAGTTAAATTTTCCAGATCTTAAGCATGTGATTCAAGCTAATTCATTGAACGGAACAACTGCTTCGCTTGTTGAGGCAAAACTTCAAGCAATATCACAACAAGGTGTTTCTTCTTCTCATAGAAAACAAAGGTCAAATAATAAGCACATTGATGAGGTTAAAAGTGGCAAGGATGAAGCTATGAAGGAACTGAAGGTTGGAGGTGGCACAAGTGACAGAAGCAAAAGTATGCAGAATGAGATATGTGATGTGGAAACTGTTCAGTTAAGTAGAATGCCATCTTTAGATATGGATATCATTTGGAATGAACTTCTAGTTTCTGATTCATGA 933 0.3676 MEDTLPKMEIFTQKELPTCLQEIVTTESKYLEDTIIRRDSYSLTSPSSTQNLFWCTSNSTSMKQEEPSMLYSSTSHIKSSEIISTTSYPTYPMSQFGLTQHQQNNGYGFHDSNKMNKNMMANLQSKSFNENWLSTTKTQPMKYGARGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGECAQLNFPDLKHVIQANSLNGTTASLVEAKLQAISQQGVSSSHRKQRSNNKHIDEVKSGKDEAMKELKVGGGTSDRSKSMQNEICDVETVQLSRMPSLDMDIIWNELLVSDS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04483 310 FunFam Ethylene-responsive transcription factor 2 148 207 - -
Trre2g04483 310 Gene3D AP2/ERF domain 149 207 IPR036955 GO:0003700|GO:0006355
Trre2g04483 310 SUPERFAMILY DNA-binding domain 149 207 IPR016177 GO:0003677
Trre2g04483 310 MobiDBLite consensus disorder prediction 235 261 - -
Trre2g04483 310 MobiDBLite consensus disorder prediction 245 261 - -
Trre2g04483 310 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 43 305 - -
Trre2g04483 310 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Trre2g04483 310 PRINTS Ethylene responsive element binding protein signature 150 161 IPR001471 GO:0003700|GO:0006355
Trre2g04483 310 SMART rav1_2 149 212 IPR001471 GO:0003700|GO:0006355
Trre2g04483 310 ProSiteProfiles AP2/ERF domain profile. 149 206 IPR001471 GO:0003700|GO:0006355
Trre2g04483 310 Pfam AP2 domain 150 198 IPR001471 GO:0003700|GO:0006355
Trre2g04483 310 CDD AP2 148 208 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04483 Trre-Chr2 52344887 52346104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04483 120 305 AP2-EREBP Transcription Factor Family AT4G13620 54.229 2.43e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre2g04483 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04483 - - gmx:100820013 315.849