Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04482 ATGGAGGATCTTAAGGTTTTTGGTCTATGGTCAAGTCCATTTTCTCAAAGGGTTGTGTGGACACTAAAATTAAAGGGTGTGAGTTATGAGTATTATGGTGAAGATCTTGCAAATAAGAGTAACTTATTATTGCAATACAATCCAATCTACAAGAAAGTTCCTGTTCTTGTACACAATGGAAAACCAATATCAGAGTCAATGGTGATTGTTCAATATATTGATGAAACTTGGCCTCAGATTGCTCTATTACCCCAAGATGCTTATGAGAGGGCCAACGCTCGTTTCTGGTCAAAATTCATCGAGGAAAAGTCAATGCAAATGATGGAGTTTTTTCTATATGATGGAGAACGACAAGAAAGAGCAATAAAAGAAACTTTGGACATTTTGAGAGTGATAGAAAATGAAAGTGGGCTTAGTGAAAAAATGTTCATTGGTGGCAACACAATTGGATTGGCAGACATAGCATTGGGTTGGGTTGCACATACTTTGCCAGTCATGGAAGAAATTGTTGGAGTCAAGTTTATCACAATTGATGCATTTCCTCATCTTCACTCTTGGGTGAAGAATTTCTTGGAAATTCCTGCTATAAAGAATAATCTCCCACCCCATGAACAACTTGTTGAGTATTTTAGGGAAAGGAGGAAGGTGTTTCTTGCAATGGCTTCTCATCACCATCATCATCACCCTTAG 690 0.3783 MEDLKVFGLWSSPFSQRVVWTLKLKGVSYEYYGEDLANKSNLLLQYNPIYKKVPVLVHNGKPISESMVIVQYIDETWPQIALLPQDAYERANARFWSKFIEEKSMQMMEFFLYDGERQERAIKETLDILRVIENESGLSEKMFIGGNTIGLADIALGWVAHTLPVMEEIVGVKFITIDAFPHLHSWVKNFLEIPAIKNNLPPHEQLVEYFRERRKVFLAMASHHHHHHP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04482 229 SFLD Glutathione Transferase (cytosolic) 1 221 IPR040079 -
Trre2g04482 229 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Trre2g04482 229 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Trre2g04482 229 CDD GST_N_Tau 4 77 - -
Trre2g04482 229 Gene3D Glutaredoxin 1 85 - -
Trre2g04482 229 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Trre2g04482 229 FunFam Tau class glutathione S-transferase 1 85 - -
Trre2g04482 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 208 IPR045073 -
Trre2g04482 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Trre2g04482 229 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Trre2g04482 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Trre2g04482 229 Pfam Glutathione S-transferase, C-terminal domain 119 188 - -
Trre2g04482 229 Gene3D - 86 221 - -
Trre2g04482 229 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Trre2g04482 229 FunFam Tau class glutathione S-transferase 83 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04482 Trre-Chr2 52323068 52324178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04482 2 213 Glutathione S-transferase Gene Family AT2G29420 48.826 2.44e-69 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04482 K00799 - egr:104456066 276.944