Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04474 ATGGCAGAGATTAAACTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGGTAGTATGGTCCCTAAATCTGAAGGGTATACCATATGAGAACATAGAGGAAGATCGTTTCAACAAGAGTCCTCAACTTCTTCAATATAATCCGGTACACAAGAAGACTCCAGTGCTAGTTCATGATGGAAAACCCATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGATATGGCCACATAACTCATTGCTTCCTGCTGATCCCTATGACAGAGCTCAAGCCCGATTTTGGGTCAAATATATCGATGATATGATTTCAGCAATGTCGGCACACCTACGTAGCAGAAGTGGTGAAGAGCGAGAGAAGGCCAAAGAGAATATATGGGAGCGACTCAGAGTTGTCGAGGATCAGTGTTTGGATGATCAGAAGAAATTCTATGGGGGGAACACCATTAACATGGTAGACATAGCTCTTGGGTCTTTTGTCAAATTTATTGAGATTCAAGAAGATATGTTTGAAGTGAAGATCTTGCAAAGTGAGAGATTCCCCCGCTTGCATTTATGGTTTAATAATTTCAAGGATGTTCCGGTCATCAAAGAAAACACCCCTGGTCAAGAGAAGTTGGTGGCTTTTTATAAGCCTCTGATTGAAAAAATATTGGCATCGTCTTGA 669 0.4021 MAEIKLHGFWYSPFTLRVVWSLNLKGIPYENIEEDRFNKSPQLLQYNPVHKKTPVLVHDGKPICESMIIVEYIDEIWPHNSLLPADPYDRAQARFWVKYIDDMISAMSAHLRSRSGEEREKAKENIWERLRVVEDQCLDDQKKFYGGNTINMVDIALGSFVKFIEIQEDMFEVKILQSERFPRLHLWFNNFKDVPVIKENTPGQEKLVAFYKPLIEKILASS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04474 222 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Trre2g04474 222 Gene3D Glutaredoxin 1 82 - -
Trre2g04474 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Trre2g04474 222 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Trre2g04474 222 CDD GST_N_Tau 4 77 - -
Trre2g04474 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Trre2g04474 222 Gene3D - 83 221 - -
Trre2g04474 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Trre2g04474 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Trre2g04474 222 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Trre2g04474 222 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Trre2g04474 222 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Trre2g04474 222 SFLD Main (cytGST) 1 220 - -
Trre2g04474 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Trre2g04474 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 207 IPR045073 -
Trre2g04474 222 FunFam Glutathione S-transferase GSTU6 1 84 - -
Trre2g04474 222 FunFam Tau class glutathione S-transferase 83 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04474 Trre-Chr2 52266209 52267089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04474 4 221 Glutathione S-transferase Gene Family AT3G09270 45.045 1.10e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04474 K00799 - gmx:547584 325.094