Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04465 ATGGCACTTTCCAATTCCATTACAAAAGAGTTGTTTCCTCAACAATTTTCAACCAATATTAGGGTTCTTGTGATTGATCATGATATCAATCTTCTCAATGCTATTGAGAAAGTACTATGCTATCAATCCGGTTACTCAGTCAAGACATGTTCCAAAGTTTCGGATGCTTTGAATCTTTTGATGGAAAAAAGGGATGGTTTTGATATGGTACTAATTGAAGCCAAAATGCCTGATATGGATTCATATCATTTTTTGCAATATGTTACACAACAAATCAATATCCCAGTTATTAGTAAGTACATATTTTATAATTAA 315 0.3175 MALSNSITKELFPQQFSTNIRVLVIDHDINLLNAIEKVLCYQSGYSVKTCSKVSDALNLLMEKRDGFDMVLIEAKMPDMDSYHFLQYVTQQINIPVISKYIFYN 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04465 104 SUPERFAMILY CheY-like 19 97 IPR011006 -
Trre2g04465 104 Gene3D - 7 99 - -
Trre2g04465 104 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 97 IPR045279 GO:0009736
Trre2g04465 104 Pfam Response regulator receiver domain 22 97 IPR001789 GO:0000160
Trre2g04465 104 ProSiteProfiles Response regulatory domain profile. 21 104 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04465 Trre-Chr2 52226990 52227532 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04465 16 97 Response Regulator Gene Family AT4G16110 39.024 1.16e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre2g04465 Response_reg 4.1e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04465 - K14491 tpra:123915068 147.517