Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04430 ATGGCTGGTAGTAATCAAGTCAACCTTAATGAATCTAAGAGTGTTGTTCCTCTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTTGCTTACAATCTACTAAGGCGTGCTGATGGAACATTCAATAGAGAGTTAGCTGAGTTCCTTGACCGCAAGGTCCCGGCCAATACTATTCCAGTTGATGGAGTGTTCTCTTTCGATCACGTGGATCGAACTACAGGACTCTTTAGTAGGGTTTATCAACCTGCTCCTGAGAATGTTACTACTTGCGGCATTATAGAGCTGGAAAAGCCCTTAAGCACCACAGAGATTGTACCTGTCATAATCTTCTTCCATGGTGGAAGCTTCTCTCATTCCTCTGCTAATAGTGCTATTTATGACACTTTCTGCCGTCGCCTTGTGAGCATGTGTAAGGCTGTTGTTGTTTCTGTAAACTACCGGCGATCACCTGAGCATCGGTATCCGTGTGCTTACGAAGACGGTTGGAATGCTCTCAATTGGGTTAAGTCAAGGACATGGCTTCAAAGTGGAAAGGATTCTAAGGTTTATGTTTACATGGCTGGTGATAGTTCCGGTGGTAACATTGCTCATCATGTCTCAGTGAGGGCTGCTGAGGAAAATGTCGAGGTACTAGGTAATATTCTTCTCCATCCACTTTTCGGTGGGGAGAAGCGTACGGAATCAGAGAAGAAACTGGATGGAAAGTATTTCGTGAAGTTGCAAGATCGCGATTGGTATTGGAGAGCTTTTCTACCTGAAGGAGAAGATAGAGATCACCATGCTTGTAATCCATTCGGACCTAAAGGTAAAAGCCTTAAAGGACTTAAGTTCCCTAAAAGCCTTGTTTGTGTGGCTGGTTTGGATCTTCTACAAGATTGGCAATTGGAATATGCAGAAGGTCTCAAGAATTATGACCATGATGTCAAACTTCTTTACCTAAAGGAAGCTACTATTGGTTTCTACTTCTTGCCTAATAATGATCACTTCTATTGCCTCATGAATGAGATAAACACCTTTGTTCATCCTCCTAACTGTTGA 1038 0.4268 MAGSNQVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRTTGLFSRVYQPAPENVTTCGIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSMCKAVVVSVNYRRSPEHRYPCAYEDGWNALNWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVSVRAAEENVEVLGNILLHPLFGGEKRTESEKKLDGKYFVKLQDRDWYWRAFLPEGEDRDHHACNPFGPKGKSLKGLKFPKSLVCVAGLDLLQDWQLEYAEGLKNYDHDVKLLYLKEATIGFYFLPNNDHFYCLMNEINTFVHPPNC 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04430 345 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Trre2g04430 345 FunFam Gibberellin receptor GID1 1 342 - -
Trre2g04430 345 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Trre2g04430 345 SUPERFAMILY alpha/beta-Hydrolases 62 334 IPR029058 -
Trre2g04430 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Trre2g04430 345 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Trre2g04430 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04430 Trre-Chr2 51921428 51923135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04430 1 341 Carbohydrate Esterase AT3G63010 78.363 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04430 K14493 - gmx:100804463 616.69