Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04411 ATGTTACTTGTCTTTTGGTCTATATGCCGGCTTGTCTTGTTTCTTTTCTTTACTTCAAATTTCCTAAACAAATCAGCCTCTGCCTTAGGAAACGAGACTGACCATTCTGCATTACTCAAATTCAAAAAATCAATAACGAATGACCCTTATGGAGTATTAAGCTCTTGGAATAGTTCTAGCCACTTTTGCAAGTGGCATGGGGTAACTTGTGGTCGAAGACATCAAAGAGTCACGGAGATAGAGTTGGAAGGATACAAACTGCAAGGTTTTATATCACCTCACGTTGGTAATCTTTCCTTTCTGAGGATCCTCCACCTTGATAATAATCGATTCCATGCTAATGTCCCACAAGAATTAGGCCGTTTATTTCGACTACAGGTCATCACTTTGGCCAATAATACTTTAGAAGGCCTATTTCCAATCAGTTTGACAAATTGCTCTCAAATGAGGGTGATCCTATTAAATAGGAATCGTTTTACTGGCCAAATACCAATGGAGATTCACTCCCTTGCCAAGCTTGATTATTTCAGTATTGCAAATAACAATCTAACCGGTCGAATTCCACCTTCTATATGGAATCTTTCTTCCCTCACTGTTCTCTCTTTGGCTTTTAACTACTTGGAGGGAAACATACCAGAAGAAATAGGCCGTTTGAAAAACTTGACAAAGATTTCAGTGGCACGGAACAAATTATCTGGTACGCTTCCCTCATCACTTTACAATTTGTCATCTCTTACTGACCTCTACACAGCAGTTAATCAATTCCACGGTTCTCTGCCAACCGACATGTTCACAACCCTCCCAAATCTTAGGCAATTTCTGTTTGCTTCGAATAGATACTCAGGTCCAATCCCAACATCCATCAGTAATGCATCTCAGATGCAATTGTTTGATATTGGTCGAAACAATTTTTCAGGACAAATTCCAAATCTTGGAAAGCTACAAAATCTTTCTATTTTGGCTGTAGGTAATAATAATCTTGGTAGCAATTCATCATCCACCGGTAATGATTGGGAGTTTATAGAGTCGTTGGTAAACTGCAGTAATATTGATGTAATATCTGTTGAGGTTAATAACTTAGGAGGTCCTTTGCCCAAAATTATTGGGAATTTGTCCACCCAAATCTCACAACTTGCTATGTCTGGCAATCTGATATCTGGAAAAATTCCAACAGAACTGGGAAGTCTTGTAAACTTGATTTTGTTGGCCATAGAGGGCACCCTCTTAACTGATGTTATTCCAGAGAGTTTTTCTAAGTTTCAAAAAATGCAACAACTGTTTTTAAAAATGAACAAACTGTCGGGCGAAATTCCGGCGTCAATTTTTGGAAATCTCAGTCAATTGTCTCTACTGGATTTATCATACAATTCGTTGATTGGAAAGATTCCTTCAACTATTGGAAATTGTAAAAAGTTGCAAGGAGTAGACTTTTCAATGAACAACCTTAGTGGAGCTATACCTACACAACTTCTTGGCCTTCCATCCTTATCAATACTACTCAACCTATCACATAACTCATTAAATGGTAATTTGCCTCCTGAGGTGGGCTTGCTTAAAAATATTGGAAGGCTTGATATATCTGAAAATCATCTCTCTGGTGGCATTCCTACACAAATTGGAGATTGCATAAGCTTGGAGTACCTTTTTTTAGAGGGTAATTCTTTAGATGGAAACATACCATCTTCCTTATCTTCACTAAAAGGTCTTCTACAACTAGACCTGTCATGGAACAACTTGTCTGGTTCAATTCCACAGGAATTACAAAATAATTCTGCGTTAGAATGGTTCAATGCTTCTTTTAACAAGTTGGAGGGTGAGGTGCCCTTGCTTGGCATTTTCCAGAATGCTAGTAGAGTTTCATTGACCGGCAATGACATGCTTTGTGGAGGAGTTGCAAAACTGAATCTGACTCTTTGCCCGCCAAAAGATGTGAAAAAGAAAAAACGCCATACCCACCGCAAGTTGATAATAATCATCTTCTCAATTGCATTTCTTCTTCTACTGTCATTTGTCCTTACTTTCATCATCTATAAGATAATGAGGAAAAGGCAGAGAAAAGCATCCACTGATTCAACAATTGAGCAACTTCCAAAGGTATCATACCAAGAACTACACCATGCCACTGATGGATTCTCGGTTCAGAACTTGATAGGAGCCGGAGGTGTAGGTTTTGTGTACAAAGGAAGACTTAATTCTGAAGAAAGAGTTGTTGCTATTAAGGTTCTAAACCTTCAGAAGAAAGGAGCTCATAAAAGTTTCATTGCCGAATGTAATGGTTTTAAAGCAATAGTTTATGAGTACATGACAAATGGAAGCTTAGAGGAATGGTTGCATCAAAATGCTGAACAACAAAGAATACTAAAATTGGAAGAAAGATTAGAAATTGTTATTGGAATTGCTTTTGCATTACACTATCTTCACTATGAATGTGAGAAGCCTATTGTTCATTGTGATTTAAAACCAAGTAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCTTAGCCAGACTTGTTTCAACAATTGATGGCAACTCCAATAACCAAGTCAGCTCAATGGGAATAAAGGGGACTATAGGTTATACTCCTCCAGAGTATGGAATGGATTCTCAATTGTCAACAGAAGGCGACATGTACAGCTTTGGTATTCTTCTTTTGGAGATGTTAACTGCGAGAAGACCAACCGATGAAATGTTTAAAGATGGGCACAACCTTCATAACTACGTAGAAATTTCATTTCCAAATAACATTTTGGAGGTTGTTGATACAACTCTCCTCTCAATGGAAGTAACAACAGAAGTTGCAAATGATTTGCATCCTAATGTTGAGAGGTGCTTATCTTCTTTATTTAAGATTGGATTATCTTGTTCAGTGGAGTCTCCAAGAGAACGAATCAATATCAAGGAAGTCATCACCGAACTCAATATAATTTCAAAAGCTTTGGCTGATCCAAGGGATTAA 2973 0.3784 MLLVFWSICRLVLFLFFTSNFLNKSASALGNETDHSALLKFKKSITNDPYGVLSSWNSSSHFCKWHGVTCGRRHQRVTEIELEGYKLQGFISPHVGNLSFLRILHLDNNRFHANVPQELGRLFRLQVITLANNTLEGLFPISLTNCSQMRVILLNRNRFTGQIPMEIHSLAKLDYFSIANNNLTGRIPPSIWNLSSLTVLSLAFNYLEGNIPEEIGRLKNLTKISVARNKLSGTLPSSLYNLSSLTDLYTAVNQFHGSLPTDMFTTLPNLRQFLFASNRYSGPIPTSISNASQMQLFDIGRNNFSGQIPNLGKLQNLSILAVGNNNLGSNSSSTGNDWEFIESLVNCSNIDVISVEVNNLGGPLPKIIGNLSTQISQLAMSGNLISGKIPTELGSLVNLILLAIEGTLLTDVIPESFSKFQKMQQLFLKMNKLSGEIPASIFGNLSQLSLLDLSYNSLIGKIPSTIGNCKKLQGVDFSMNNLSGAIPTQLLGLPSLSILLNLSHNSLNGNLPPEVGLLKNIGRLDISENHLSGGIPTQIGDCISLEYLFLEGNSLDGNIPSSLSSLKGLLQLDLSWNNLSGSIPQELQNNSALEWFNASFNKLEGEVPLLGIFQNASRVSLTGNDMLCGGVAKLNLTLCPPKDVKKKKRHTHRKLIIIIFSIAFLLLLSFVLTFIIYKIMRKRQRKASTDSTIEQLPKVSYQELHHATDGFSVQNLIGAGGVGFVYKGRLNSEERVVAIKVLNLQKKGAHKSFIAECNGFKAIVYEYMTNGSLEEWLHQNAEQQRILKLEERLEIVIGIAFALHYLHYECEKPIVHCDLKPSNVLLDDDMVAHVSDFGLARLVSTIDGNSNNQVSSMGIKGTIGYTPPEYGMDSQLSTEGDMYSFGILLLEMLTARRPTDEMFKDGHNLHNYVEISFPNNILEVVDTTLLSMEVTTEVANDLHPNVERCLSSLFKIGLSCSVESPRERINIKEVITELNIISKALADPRD 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04411 990 Gene3D Phosphorylase Kinase; domain 1 680 767 - -
Trre2g04411 990 SUPERFAMILY L domain-like 345 629 - -
Trre2g04411 990 SMART LRR_typ_2 445 469 IPR003591 -
Trre2g04411 990 SMART LRR_typ_2 493 518 IPR003591 -
Trre2g04411 990 SMART LRR_typ_2 194 218 IPR003591 -
Trre2g04411 990 SMART LRR_typ_2 420 444 IPR003591 -
Trre2g04411 990 SMART LRR_typ_2 98 122 IPR003591 -
Trre2g04411 990 SMART LRR_typ_2 242 266 IPR003591 -
Trre2g04411 990 SMART LRR_typ_2 566 589 IPR003591 -
Trre2g04411 990 SMART LRR_typ_2 314 337 IPR003591 -
Trre2g04411 990 SUPERFAMILY Protein kinase-like (PK-like) 689 978 IPR011009 -
Trre2g04411 990 SMART serkin_6 711 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g04411 990 Pfam Protein tyrosine and serine/threonine kinase 760 976 IPR001245 GO:0004672|GO:0006468
Trre2g04411 990 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 274 - -
Trre2g04411 990 SUPERFAMILY L domain-like 31 327 - -
Trre2g04411 990 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Trre2g04411 990 PANTHER OS04G0122200 PROTEIN 232 976 - -
Trre2g04411 990 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 645 - -
Trre2g04411 990 Gene3D Ribonuclease Inhibitor 188 334 IPR032675 -
Trre2g04411 990 Gene3D Transferase(Phosphotransferase) domain 1 768 987 - -
Trre2g04411 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Trre2g04411 990 ProSiteProfiles Protein kinase domain profile. 711 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g04411 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 31 190 - -
Trre2g04411 990 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Trre2g04411 990 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 768 989 - -
Trre2g04411 990 Gene3D Ribonuclease Inhibitor 335 637 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04411 Trre-Chr2 51672916 51676052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04411 31 978 Receptor kinase-like Gene Family AT3G47570 43.553 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre2g04411 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04411 - - gmx:100785561 1058.9