Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04397 ATGGCACTCAAGATTTATGGTCTAGCCATGTCCACAAACACAACTCGTGCCATGATTTGTTTACATGAAAAAGAAGTTGAATTTGAGCTTGTTCCAGTCAATGTGTTTGCTTCTGAGCATAAACAGCCTCCTTTTCTCAACAAAAATCCCTTTGGTTTGATTCCTGTACTTGAAGATGATGATCTCACCCTCTTTGAGTCAAGAGCTATAGCATCATATGTAGCTGAAAAATTCAAGGAAATTGGACCTGATTTGATTAGGCACAAAGACATAAAAGAAGCTTCATTAGTCAAAATGTGGACAGAGGTAGAGTCTCACTACTATGACCCTGCAGTCTCACCAATAATCTATGAATACTTTGTGGCTCCATTTCAAGGCCAAGAACCAAACAAGACAGTGATTGAAACAAACATGGAGAAGTTGAAGATTGTACTTGATGTGTATGAGGCAAAACTAAGCACAACAAAGTACCTTGCTGGAGATTTTTATAGTCTTGCTGATCTTAGTCATATATCTGAAACTCATTATTTTATGCAAACTCCTTGTGCTTCAATGATCAATGAAAGGATTCATGTTAAGGCTTGGTGGGAAGATATATCTTCTAGGCCTGCTTTTCAAAAAGTTGTGAGTGGTATGACTTTTGGTCAGAATGATCAGAAGTGA 663 0.3771 MALKIYGLAMSTNTTRAMICLHEKEVEFELVPVNVFASEHKQPPFLNKNPFGLIPVLEDDDLTLFESRAIASYVAEKFKEIGPDLIRHKDIKEASLVKMWTEVESHYYDPAVSPIIYEYFVAPFQGQEPNKTVIETNMEKLKIVLDVYEAKLSTTKYLAGDFYSLADLSHISETHYFMQTPCASMINERIHVKAWWEDISSRPAFQKVVSGMTFGQNDQK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04397 220 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 210 - -
Trre2g04397 220 SUPERFAMILY Thioredoxin-like 2 80 IPR036249 -
Trre2g04397 220 SFLD Main.5: Phi-like 1 212 - -
Trre2g04397 220 Pfam Glutathione S-transferase, C-terminal domain 116 203 IPR004046 -
Trre2g04397 220 Gene3D Glutaredoxin 1 85 - -
Trre2g04397 220 Gene3D - 87 209 - -
Trre2g04397 220 FunFam Glutathione S-transferase F2 2 86 - -
Trre2g04397 220 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Trre2g04397 220 FunFam Glutathione S-transferase F2 88 209 - -
Trre2g04397 220 CDD GST_C_Phi 92 209 IPR034347 -
Trre2g04397 220 CDD GST_N_Phi 2 77 - -
Trre2g04397 220 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Trre2g04397 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Trre2g04397 220 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Trre2g04397 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04397 Trre-Chr2 51441060 51442361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04397 1 215 Glutathione S-transferase Gene Family AT3G62760 57.674 1.81e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04397 K00799 - gmx:100815147 389.808