Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04396 ATGCGTGTTACTGCAACTCTTTATGAAAAACAGATTGAATTTGAGTTTGTTGACATTAACCTCAGGAATGGTGATCACAAAAAGGAACCTTTCATATCACTCAATCCATTTGGTCAAATTCCTGCATTTGAAGATGGAGATTTAAAACTATTTGAATCAAGGGCGATAACACAATATATTGATCATGAGTATGGTGATAAGGGTACTAAGTTAACAATCAGTGACTCCAAGAAGATGGCAATAATGAGGTTGTGGTTGGAAGTCGAAAGCCAACACTACGATCAAGTATCAACAAAACTTGTTTGGGAATTGGGGTTAAAACCTTTATTTGGAATACCTTTGGATACAAAAATTGTGGAAGAGAATGAAGCTAAGTTGGATAGTATTCTTGATGTGTATGAGAAAAGATTGTCTGAATCCAAATACTTGGGAGGTGAGAGTTTCACCTTGGTGGATCTGTATCACTTACCTTCTCTTCATTACTTGATGAAGTCACATATCAAGAAGTTGTTTGAATCAAGACCCTATGTTAGTGCTTGGGTGGCTGATATAACTGTAAGACCAGCTTGGTCTAAAGTCATTGCCATGATACCTAATTAA 600 0.3633 MRVTATLYEKQIEFEFVDINLRNGDHKKEPFISLNPFGQIPAFEDGDLKLFESRAITQYIDHEYGDKGTKLTISDSKKMAIMRLWLEVESQHYDQVSTKLVWELGLKPLFGIPLDTKIVEENEAKLDSILDVYEKRLSESKYLGGESFTLVDLYHLPSLHYLMKSHIKKLFESRPYVSAWVADITVRPAWSKVIAMIPN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04396 199 SUPERFAMILY GST C-terminal domain-like 67 194 IPR036282 -
Trre2g04396 199 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 195 - -
Trre2g04396 199 FunFam Glutathione S-transferase F2 74 194 - -
Trre2g04396 199 Pfam Glutathione S-transferase, N-terminal domain 2 61 IPR004045 -
Trre2g04396 199 SFLD Main (cytGST) 2 185 - -
Trre2g04396 199 Gene3D - 74 199 - -
Trre2g04396 199 Pfam Glutathione S-transferase, C-terminal domain 115 188 IPR004046 -
Trre2g04396 199 FunFam Glutathione S-transferase F2 1 72 - -
Trre2g04396 199 SUPERFAMILY Thioredoxin-like 1 68 IPR036249 -
Trre2g04396 199 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 68 IPR004045 -
Trre2g04396 199 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 75 199 IPR010987 -
Trre2g04396 199 CDD GST_C_Phi 77 194 IPR034347 -
Trre2g04396 199 Gene3D Glutaredoxin 1 72 - -
Trre2g04396 199 SFLD Glutathione Transferase (cytosolic) 2 185 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04396 Trre-Chr2 51439177 51440060 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04396 2 194 Glutathione S-transferase Gene Family AT1G02930 59.067 1.37e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04396 K00799 - gmx:100799868 303.908