Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04394 ATGGCAACAATAAAAGTCCATGGAAGCCCCTACTCAACGGCAACAATGCGGGTTACTGCAATTCTGTGTGAAAAACAGCTTCAATTTGAGTTAGTTTATGTTAATGTAAGGAATGGTGATCACAAAAAGGAACCTTTCATATCACAACACAATCCATTTGGTCTAGTTCCTGCATTTGAAGATGGAGATTTAAAGCTCTTTGAATCAAGGGCAATAACACAATATATTAATCATGAGTATGGTGATAAGGGAACTAAGTTAATAACAAGCAGTGATGACTCCAAGAAAATGGCAATAATGTGGATGTGGTCAGAAGTGGAGAGCCTACACTTTGATCAAGCAGCATCAAAACTTGTTTGGGAACTAGGGATAAAACCTTTATTTGGAGCTCCTTTGGATCCAAAAATTGTGGAAGAGAATGAAGCTAAGTTGGATAGTATTCTTAATATGTATGAGAAAAGATTGTCTGAATCCAAATACTTGGGAGGTGAGAGTTTCACCTTGGTAGATTTGCATCACTTACCCTCTCTTTATTATTTGATGAAGTCACATATTAAGAAGTTGTTTGAATCAAGACCTTATGTTAGTGCTTGGGTGGCTGATATTACTTCAAGACCAGCCTGGTCTAAAGTCATTGCCATGATACCTAATTAA 654 0.37 MATIKVHGSPYSTATMRVTAILCEKQLQFELVYVNVRNGDHKKEPFISQHNPFGLVPAFEDGDLKLFESRAITQYINHEYGDKGTKLITSSDDSKKMAIMWMWSEVESLHFDQAASKLVWELGIKPLFGAPLDPKIVEENEAKLDSILNMYEKRLSESKYLGGESFTLVDLHHLPSLYYLMKSHIKKLFESRPYVSAWVADITSRPAWSKVIAMIPN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04394 217 CDD GST_C_Phi 95 212 IPR034347 -
Trre2g04394 217 Pfam Glutathione S-transferase, N-terminal domain 3 77 IPR004045 -
Trre2g04394 217 Gene3D - 93 217 - -
Trre2g04394 217 Gene3D Glutaredoxin 1 88 - -
Trre2g04394 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 217 IPR010987 -
Trre2g04394 217 FunFam Glutathione S-transferase F2 91 212 - -
Trre2g04394 217 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Trre2g04394 217 SUPERFAMILY Thioredoxin-like 1 84 IPR036249 -
Trre2g04394 217 FunFam Glutathione S-transferase F2 3 88 - -
Trre2g04394 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 213 - -
Trre2g04394 217 Pfam Glutathione S-transferase, C-terminal domain 117 206 IPR004046 -
Trre2g04394 217 SFLD Glutathione Transferase (cytosolic) 1 214 IPR040079 -
Trre2g04394 217 SFLD Main.5: Phi-like 1 214 - -
Trre2g04394 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04394 Trre-Chr2 51433597 51434840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04394 1 212 Glutathione S-transferase Gene Family AT1G02930 58.962 1.13e-84 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04394 K00799 - gmx:100799868 306.605