Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04345 ATGAGCGGAGCGAAGGGAAAGAAGAAGGTAACAAGCTTCGTGATCGATTGCGCGAAGCCGGTTGAAGACAAGATTATGGACATTGCTTCCCTCGAGAAGTTTCTTCAAGAGAGGATTAAGGTTGGTGGTAAAGCTGGTGCCCTTGGTGATTCCGTCACCGTTACTCGTGAGAAGAGCAAAATCACCGTTACCGCCGATAGCAATTTCTCCAAAAGGTATCTGAAGTACTTAACAAAGAAGTACTTGAAAAAGCACAATGTAAGGGATTGGCTTCGTTTTATTGCTTCCAACAAGGACCGCAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.4444 MSGAKGKKKVTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTADSNFSKRYLKYLTKKYLKKHNVRDWLRFIASNKDRNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04345 119 Gene3D - 1 119 IPR038526 -
Trre2g04345 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Trre2g04345 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Trre2g04345 119 Pfam Ribosomal L22e protein family 8 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04345 Trre-Chr2 50999285 51000687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04345 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.655 6.30e-64 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04345 K02891 - gmx:100500073 214.542