Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04344 ATGGTTGGGTATTTGTCCAGTATACTGGGGTATGCTGAGAAATGTGAAAGCTACTTGATTTTTAGTGGAGAAACTGCTCTTGGGAATAGTGTTAGGATAATTTTGTATTTTCTTGGGCTTGCCTATTGTTTCATTGGGTTATCGGCTATAACGGCCCGATTCTTTCAATCTATGGAAAATGTTGTCAAACATACAAGGGAGGTAGTGGTGATAGATCCTGTTACTAAAGCTGAAATTATTACACATGAAAAAGTTTGGAATTATACAATTGCAGATATTAGTTTGTTGGCCTTTGGAACCAGTTTTCCTCAGATATCGTTAGCTACTATTGATGCTATACGAAATATAGGGAATCTCTATGCTGGAGGTTTGGGACCTGGAACACTCGTGGGTTCTGCTGCGTTTGACCTCTTCCCCATCCACGCTGTTTGTGTAGTAATTCCAAAAGCTGGAGAGTTGAAAAAGATTGCTGATCTAGGAGTATGGATAGTGGAGTTATTTTGGTCATTTTGGGCTTATTTTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTGATAACTTTGTCGGAGGCCTTGTTGACAGTACTTCAGTATGGATTACTGTTGATTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTCTACCTATTGCAAGAGATGAGAGGCCAGAAGATTGGGTGCCAGAAGAGACTCCTAGACAAAAGTCCTATGAGACAGTGGAGTGCTTTGAGATAACCCATTTTAATGAAGAGAACAGGGACACTGTTGATATTTTTTCCATTCATTCAGAAAACTCAAGAGATACATACGTAAGAGTACCGCAAACAGACGATGCAGAAAATTCTGGCAAAGTTATGGAAACAGAGCTTGAGGATACCCGTTTGCTTACTATTTGGAGACAGCAATTTGTGGATGCACTGACGGTGGAGAGCCAAAAATCTAAAAAGATAGACAATATCTATATCCGCATGGCTAAAATTTTCTGGCAGTTGTTGCTTTTACCATGGAGATTTATGTTTGCTTTTGTTCCTCCATGCCATATTGCTCATGGCTGGATTTCTTTCATTTGCTCTCTGCTTTTCATCAGTGGGATAGCTTACATTGTGACTAAGATAACAGATCTTATAAGTTGTGTCACAGGAATAAATGCCTACGTCATAGCATTTACAGCACTAGCCAGTGGAACTTCATGGCCTGATTTAGTGGCGAGCAAGATTGCTGCTGAACGTCAAAAAACAGCAGACTCTGCAATTGCAAACATCACTTGCAGTAATTCAGTGAATATATATGTCGGCATTGGTGTTCCATGGCTTATAGATACTTTGTACAATTTCATAGCATATAGAGAACCTCTTCGAATCGAAAATGCAGGGGGACTTAGCTTTTCATTGATTGTTTTCTTTGCCACTTCTGTTGGATGTATATCAGTTTTGGTTCTTAGGCGTATAGTTTTTGGCGCAGAGCTTGGAGGACCAAGGCTTTGGGCATGGATTACCTGCGCATTTTTCATGCTGCTCTGGATTATTTTTGTTGTACTGTCTTCACTTAAGGTTTCTGGTTTCATTTAG 1581 0.3978 MVGYLSSILGYAEKCESYLIFSGETALGNSVRIILYFLGLAYCFIGLSAITARFFQSMENVVKHTREVVVIDPVTKAEIITHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVIPKAGELKKIADLGVWIVELFWSFWAYFWLYIILEVWTPNVITLSEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPRQKSYETVECFEITHFNEENRDTVDIFSIHSENSRDTYVRVPQTDDAENSGKVMETELEDTRLLTIWRQQFVDALTVESQKSKKIDNIYIRMAKIFWQLLLLPWRFMFAFVPPCHIAHGWISFICSLLFISGIAYIVTKITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIENAGGLSFSLIVFFATSVGCISVLVLRRIVFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04344 526 PANTHER SODIUM/CALCIUM EXCHANGER 14 297 - -
Trre2g04344 526 Pfam Sodium/calcium exchanger protein 36 208 IPR004837 GO:0016020|GO:0055085
Trre2g04344 526 Pfam Sodium/calcium exchanger protein 355 518 IPR004837 GO:0016020|GO:0055085
Trre2g04344 526 Gene3D - 308 520 IPR044880 -
Trre2g04344 526 Gene3D - 88 222 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04344 Trre-Chr2 50989335 50994534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04344 6 526 Antiporters AT2G47600 71.727 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04344 K03452 - gmx:100792839 886.715