Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04343 ATGGTTGGGTATTTGTCCAGTATACTGGGGTATGCTGAGAAATGTGAAAGCTACTTGATTTTTAGTGGAGAAACTGCTCTTGGGAATAGTGTTAGGATAATTTTGTATTTTCTTGGGCTTGCCTATTGTTTCATTGGGTTATCGGCTATAACGGCCCGATTCTTTCAATCTATGGAAAATGTTGTCAAACATACAAGGGAGGTAGTGGTGATAGATCCTGTTACTAAAGCTGAAATTATTACACATGAAAAAGTTTGGAATTATACAATTGCAGATATTAGTTTGTTGGCCTTTGGAACCAGTTTTCCTCAGATATCGTTAGCTACTATTGATGCTATACGAAATATAGGGAATCTCTATGCTGGAGGTTTGGGACCTGGAACACTCGTGGGTTCTGCTGCGTTTGACCTCTTCCCCATCCACGCTGTTTGTGTAGTAATTCCAAAAGCTGGAGAGTTGAAAAAGATTGCTGATCTAGGAGTATGGACTCCAAACGTGATAACTTTGTCGGAGGCCTTGTTGACAGTACTTCAGTATGGATTACTGTTGATTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTCTACCTATTGCAAGAGATGAGAGGCCAGAAGATTGGGTGCCAGAAGAGACTCCTAGACAAAAGTCCTATGAGACAGTGGAGTGCTTTGAGATAACCCATTTTAATGAAGAGAACAGGGACACTGTTGATATTTTTTCCATTCATTCAGAAAACTCAAGAGATACATACGTAAGAGTACCGCAAACAGACGATGCAGAAAATTCTGGCAAAGTTATGGAAACAGAGCTTGAGGATACCCGTTTGCTTACTATTTGGAGACAGCAATTTGTGGATGCACTGACGGTGGAGAGCCAAAAATCTAAAAAGATAGACAATATCTATATCCGCATGGCTAAAATTTTCTGGCAGTTGTTGCTTTTACCATGGAGATTTATGTTTGCTTTTGTTCCTCCATGCCATATTGCTCATGGCTGGATTTCTTTCATTTGCTCTCTGCTTTTCATCAGTGGGATAGCTTACATTGTGACTAAGATAACAGATCTTATAAGTTGTGTCACAGGAATAAATGCCTACGTCATAGCATTTACAGCACTAGCCAGTGGAACTTCATGGCCTGATTTAGTGGCGAGCAAGATTGCTGCTGAACGTCAAAAAACAGCAGACTCTGCAATTGCAAACATCACTTGCAGTAATTCAGTGAATATATATGTCGGCATTGGTGTTCCATGGCTTATAGATACTTTGTACAATTTCATAGCATATAGAGAACCTCTTCGAATCGAAAATGCAGGGGGACTTAGCTTTTCATTGATTGTTTTCTTTGCCACTTCTGTTGGATGTATATCAGTTTTGGTTCTTAGGCGTATAGTTTTTGGCGCAGAGCTTGGAGGACCAAGGCTTTGGGCATGGATTACCTGCGCATTTTTCATGCTGCTCTGGATTATTTTTGTTGTACTGTCTTCACTTAAGGTTTCTGGTTTCATTTAG 1518 0.4012 MVGYLSSILGYAEKCESYLIFSGETALGNSVRIILYFLGLAYCFIGLSAITARFFQSMENVVKHTREVVVIDPVTKAEIITHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVIPKAGELKKIADLGVWTPNVITLSEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPRQKSYETVECFEITHFNEENRDTVDIFSIHSENSRDTYVRVPQTDDAENSGKVMETELEDTRLLTIWRQQFVDALTVESQKSKKIDNIYIRMAKIFWQLLLLPWRFMFAFVPPCHIAHGWISFICSLLFISGIAYIVTKITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIENAGGLSFSLIVFFATSVGCISVLVLRRIVFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04343 505 Gene3D - 287 499 IPR044880 -
Trre2g04343 505 Gene3D - 88 201 IPR044880 -
Trre2g04343 505 Pfam Sodium/calcium exchanger protein 334 497 IPR004837 GO:0016020|GO:0055085
Trre2g04343 505 Pfam Sodium/calcium exchanger protein 36 180 IPR004837 GO:0016020|GO:0055085
Trre2g04343 505 PANTHER SODIUM/CALCIUM EXCHANGER 282 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04343 Trre-Chr2 50989335 50994534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04343 6 505 Antiporters AT2G47600 68.311 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04343 K03452 - gmx:100792839 828.935