Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04311 ATGGCGGCATTGTCTTTTTCAGTTGCATCTGTTGTTGAGGATGTTCTTCAACAACATGGTACTCGTCTCAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTCAGAAGATATGAAGCAGCAGGGTGGTTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAACCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTTTGTAATGTTCTTAACAAGGTTCAACCTGGTGCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGGACTAATCCCCGATGGAGCGCCTTTATCGGCTTTTCAGTATTTTGAAAATGTTAGGAACTTTCTGGTGGCTGTTCAGGAAATTGGAATTCCTACCTTTGAATCATCTGATCTGGAACAAGGAGGAAAATCGTCAAGGATTGTGAACAGTGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGTGCTAATGGTGTGTGGAAATTTAGTGGAACTATCAAACCTGCAATCACTACAAAATCTTTTGTGAGAAAAAACTCGGAGCCATTTACCAATTCCTTGTCAAGAACCTCTTCGATCAACGAAAAAAATGAAAAATCTATGACTGCTTTTGCCTCTGATGTTGTTGAGTCTAATAAAATGTCTAGTTCTCATTCTTTAGGTATGCTTGTTCGCGCAATACTATTCGATAAGAAGCCGGAAGAAGTCCCAACGTTGGTTGAATCTGTTTTGACTAAAGTCGTGGAGGAGTTCGAGCATCGCATTGCAAGCCAGGATGAACAGACAAAAACAACTTCAAGAGGTGCAGTGTCTCAAAGCGATGGAGCTGTAGCAAAGTTTACTATGGCACGTAAAAAGGTGGATAACAAGATTTCTACAGTAACAAAGAAAGAAGAATTCATCCATAAAAACCATGTTGCGGATGAGGAATCAAAGAGACAACTTATGAAGCAGCAAATGCTCTTTGATCAGCGGCAGAAAGATATTCAAGAGTTAAAGCATACAGTTCAAACCACCAAAGTTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATTTAGGCATGCATATTCATGGTTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGGAGTATTAGGGTGTACTGTCGAGTAAGACCTTTCTTATCCGGACAACCAAATCATTTGAGTACTGTGGAGAACATAGAAGATGGAGTTATCACAATTAGTGTTCCGTCAAAGAATGGGAAAGGGTGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCCGCAGCTCAAGGGGAAGTCTTCGCTGATATGCAGCCACTCGTTAGGTCTGTTCTTGATGGTTTTAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGAAATTCGTACCAACTCTCAAAGAGGGCTCAGTGTACCAGATGCAAGCCTTGTCCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACTTGGGCCATAAGAACCGTGCAGTCGGAGCAACAGCCCTTAATGACCGTAGTAGCCGATCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCCTACGGGGATGCATGCATCTTGTTGACTTGGCAGGGAGTGAGAGGGTCGACAAATCTGAGGCGACAGGTGATAGACTGAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATAGCTTCTCTTGCTCAGAAAAACCAACATGTCCCTTATAGAAATAGCAAACTCACGCAATTACTCCAAGATTCACTTGGAGGACAGGCGAAGACACTAATGTTTGTTCACATTAGTCCAGAGGCTAATGCTATTGGAGAAACAATTAGCACTCTAAAATTTGCAGAAAGAGTTGCGACAGTTGAACTTGGTGCTGCTCGAGTAAACAAGGACGGAGCAGATGTCAAAGAGCTCAAAGATCAGATTGCTAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAAATTCAGAACATTCTCTATCTGGAAGCTCTGGAAAGTATAGGACAACGGCTAGTGAACTATCACCCTATCATGCAAGCCAGCGGGCTGCGGATATCGTGGATGGTCCCTTTGGGTTCCGGCAACCAATGATTGATGTCGGCAACTTAGAGCTTCAGAGCAATACTACATTGAGGCAAAAAACTCAGAGCTTTGATTTTGATGAGATATTAACAAATTCACCACCGTGGCCGCCAGTGAATGGTCTTGTTCAAAACTGCGTGGAAGATGATGATGATGATAAAGAAACCGGTACAGGAGAGTGGGTTGATAAGGTCATGGTAAACAAGCTAGATGTGAACAAAACCGGTAACATGTTAGGGTGTTGGGAAACAGATAATGGGAATTTATCCGAGGAATTTTATCAGAAATATCTCCAAGGTTCTTCCCAAGTATACTCGGAACGATCTTACAATATGTTCATGAGAGGCAACCAGTTTAACATCGCTGGTTCAGATGACACCGATGATGTTGATGCTGCAACCAGTGATTCCTCGGAGCATGACTTGCTTTGGCAATTTAATCATTCCAAAGTTACGAGCATAGCCAATGGAAATCAATCAAAGGGTAGGAAATTTATCTCAAAGTCGGCAAAAAGCCCTGCAGCATTGAGCAAGAATAGTATTCATTCGTCTACTGCTCCTTCACCTTCACGGAAACAAACGAATGGTGTCTCACATCGAACACCAACAAGACAACCAGTTCCTGTTGACATGAAACGGAAAACTGGGACTAGAAAGTGA 2904 0.4201 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVSKVVESPVDSGLIPDGAPLSAFQYFENVRNFLVAVQEIGIPTFESSDLEQGGKSSRIVNSVLALKSYSEWKQTGANGVWKFSGTIKPAITTKSFVRKNSEPFTNSLSRTSSINEKNEKSMTAFASDVVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLTKVVEEFEHRIASQDEQTKTTSRGAVSQSDGAVAKFTMARKKVDNKISTVTKKEEFIHKNHVADEESKRQLMKQQMLFDQRQKDIQELKHTVQTTKVGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFLSGQPNHLSTVENIEDGVITISVPSKNGKGCRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQEIRTNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAIGETISTLKFAERVATVELGAARVNKDGADVKELKDQIASLKAALARKEGNSEHSLSGSSGKYRTTASELSPYHASQRAADIVDGPFGFRQPMIDVGNLELQSNTTLRQKTQSFDFDEILTNSPPWPPVNGLVQNCVEDDDDDKETGTGEWVDKVMVNKLDVNKTGNMLGCWETDNGNLSEEFYQKYLQGSSQVYSERSYNMFMRGNQFNIAGSDDTDDVDAATSDSSEHDLLWQFNHSKVTSIANGNQSKGRKFISKSAKSPAALSKNSIHSSTAPSPSRKQTNGVSHRTPTRQPVPVDMKRKTGTRK 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04311 967 PANTHER KINESIN-LIKE PROTEIN KLP-3 501 920 IPR027640 GO:0003777|GO:0007018
Trre2g04311 967 Coils Coil 689 709 - -
Trre2g04311 967 SMART kinesin_4 398 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 FunFam Kinesin-related protein3 512 715 - -
Trre2g04311 967 FunFam Kinesin-like protein KIN-14I isoform A 24 176 - -
Trre2g04311 967 MobiDBLite consensus disorder prediction 903 967 - -
Trre2g04311 967 MobiDBLite consensus disorder prediction 903 950 - -
Trre2g04311 967 Pfam Kinesin motor domain 406 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 Pfam Kinesin motor domain 500 674 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 Gene3D - 24 185 IPR036872 -
Trre2g04311 967 ProSiteProfiles Kinesin motor domain profile. 400 675 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 Gene3D Kinesin motor domain 343 499 IPR036961 -
Trre2g04311 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 707 IPR027417 -
Trre2g04311 967 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Trre2g04311 967 SMART ch_5 39 157 IPR001715 GO:0005515
Trre2g04311 967 CDD CH_AtKIN14-like 39 156 - -
Trre2g04311 967 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Trre2g04311 967 PRINTS Kinesin heavy chain signature 625 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 PRINTS Kinesin heavy chain signature 545 562 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 PRINTS Kinesin heavy chain signature 576 594 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g04311 967 Gene3D Kinesin motor domain 500 716 IPR036961 -
Trre2g04311 967 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04311 Trre-Chr2 50626258 50632009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04311 388 675 Calmodulin-binding Proteins AT5G65930 39.412 1.70e-65 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04311 K10406 - gmx:100801279 1541.17