Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g04309 | ATGGCGGCATTGTCTTTTTCAGTTGCATCTGTTGTTGAGGATGTTCTTCAACAACATGGTACTCGTCTCAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTCAGAAGATATGAAGCAGCAGGGTGGTTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAACCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTTTGTAATGTTCTTAACAAGGTTCAACCTGGTGCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGGACTAATCCCCGATGGAGCGCCTTTATCGGCTTTTCAGTATTTTGAAAATGTTAGGAACTTTCTGGTGGCTGTTCAGGAAATTGGAATTCCTACCTTTGAATCATCTGATCTGGAACAAGGAGGAAAATCGTCAAGGATTGTGAACAGTGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGTGCTAATGGTGTGTGGAAATTTAGTGGAACTATCAAACCTGCAATCACTACAAAATCTTTTGTGAGAAAAAACTCGGAGCCATTTACCAATTCCTTGTCAAGAACCTCTTCGATCAACGAAAAAAATGAAAAATCTATGACTGCTTTTGCCTCTGATGTTGTTGAGTCTAATAAAATGTCTAGTTCTCATTCTTTAGGTATGCTTGTTCGCGCAATACTATTCGATAAGAAGCCGGAAGAAGTCCCAACGTTGGTTGAATCTGTTTTGACTAAAGTCGTGGAGGAGTTCGAGCATCGCATTGCAAGCCAGGATGAACAGACAAAAACAACTTCAAGAGGTGCAGTGTCTCAAAGCGATGGAGCTGTAGCAAAGTTTACTATGGCACGTAAAAAGGTGGATAACAAGATTTCTACAGTAACAAAGAAAGAAGAATTCATCCATAAAAACCATGTTGCGGATGAGGAATCAAAGAGACAACTTATGAAGCAGCAAATGCTCTTTGATCAGCGGCAGAAAGATATTCAAGAGTTAAAGCATACAGTTCAAACCACCAAAGTTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATTTAGGCATGCATATTCATGGTTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGGAGTATTAGGGTGTACTGTCGAGTAAGACCTTTCTTATCCGGACAACCAAATCATTTGAGTACTGTGGAGAACATAGAAGATGGAGTTATCACAATTAGTGTTCCGTCAAAGAATGGGAAAGGGTGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCCGCAGCTCAAGGGGAAGTCTTCGCTGATATGCAGCCACTCGTTAGGTCTGTTCTTGATGGTTTTAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTTATACAGCAAATCAAAGAAAGGACACTTTTCGCTACGATGTGTCTGTTCAGATGATTGAAATTTATAATGAGCAAGTCAGAGATCTGTTAGTTACGGATGGAACAACCAAAAGGTTAGAAATTCGTACCAACTCTCAAAGAGGGCTCAGTGTACCAGATGCAAGCCTTGTCCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACTTGGGCCATAAGAACCGTGCAGTCGGAGCAACAGCCCTTAATGACCGTAGTAGCCGATCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCCTACGGGGATGCATGCATCTTGTTGACTTGGCAGGGAGTGAGAGGGTCGACAAATCTGAGGCGACAGGTGATAGACTGAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATAGCTTCTCTTGCTCAGAAAAACCAACATGTCCCTTATAGAAATAGCAAACTCACGCAATTACTCCAAGATTCACTTGGAGGACAGGCGAAGACACTAATGTTTGTTCACATTAGTCCAGAGGCTAATGCTATTGGAGAAACAATTAGCACTCTAAAATTTGCAGAAAGAGTTGCGACAGTTGAACTTGGTGCTGCTCGAGTAAACAAGGACGGAGCAGATGTCAAAGAGCTCAAAGATCAGATTGCTAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAAATTCAGAACATTCTCTATCTGGAAGCTCTGGAAAGTATAGGACAACGGCTAGTGAACTATCACCCTATCATGCAAGCCAGCGGGCTGCGGATATCGTGGATGGTCCCTTTGGGTTCCGGCAACCAATGATTGATGTCGGCAACTTAGAGCTTCAGAGCAATACTACATTGAGGCAAAAAACTCAGAGCTTTGATTTTGATGAGATATTAACAAATTCACCACCGTGGCCGCCAGTGAATGGTCTTGTTCAAAACTGCGTGGAAGATGATGATGATGATAAAGAAACCGGTACAGGAGAGTGGGTTGATAAGGTCATGGTAAACAAGCTAGATGTGAACAAAACCGGTAACATGTTAGGGTGTTGGGAAACAGATAATGGGAATTTATCCGAGGAATTTTATCAGAAATATCTCCAAGGTTCTTCCCAAGTATACTCGGAACGATCTTACAATATGTTCATGAGAGGCAACCAGTTTAACATCGCTGGTTCAGATGACACCGATGATGTTGATGCTGCAACCAGTGATTCCTCGGAGCATGACTTGCTTTGGCAATTTAATCATTCCAAAGTTACGAGCATAGCCAATGGAAATCAATCAAAGGGTAGGAAATTTATCTCAAAGTCGGCAAAAAGCCCTGCAGCATTGAGCAAGAATAGTATTCATTCGTCTACTGCTCCTTCACCTTCACGGAAACAAACGAATGGTGTCTCACATCGAACACCAACAAGACAACCAGTTCCTGTTGACATGAAACGGAAAACTGGGACTAGAAAGTGA | 3054 | 0.4172 | MAALSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVSKVVESPVDSGLIPDGAPLSAFQYFENVRNFLVAVQEIGIPTFESSDLEQGGKSSRIVNSVLALKSYSEWKQTGANGVWKFSGTIKPAITTKSFVRKNSEPFTNSLSRTSSINEKNEKSMTAFASDVVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLTKVVEEFEHRIASQDEQTKTTSRGAVSQSDGAVAKFTMARKKVDNKISTVTKKEEFIHKNHVADEESKRQLMKQQMLFDQRQKDIQELKHTVQTTKVGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFLSGQPNHLSTVENIEDGVITISVPSKNGKGCRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTTKRLEIRTNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAIGETISTLKFAERVATVELGAARVNKDGADVKELKDQIASLKAALARKEGNSEHSLSGSSGKYRTTASELSPYHASQRAADIVDGPFGFRQPMIDVGNLELQSNTTLRQKTQSFDFDEILTNSPPWPPVNGLVQNCVEDDDDDKETGTGEWVDKVMVNKLDVNKTGNMLGCWETDNGNLSEEFYQKYLQGSSQVYSERSYNMFMRGNQFNIAGSDDTDDVDAATSDSSEHDLLWQFNHSKVTSIANGNQSKGRKFISKSAKSPAALSKNSIHSSTAPSPSRKQTNGVSHRTPTRQPVPVDMKRKTGTRK | 1017 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g04309 | 1017 | FunFam | Kinesin-like protein KIN-14I isoform A | 24 | 176 | - | - | |
Trre2g04309 | 1017 | Gene3D | - | 24 | 185 | IPR036872 | - | |
Trre2g04309 | 1017 | Pfam | Calponin homology (CH) domain | 40 | 159 | IPR001715 | GO:0005515 | |
Trre2g04309 | 1017 | SUPERFAMILY | Calponin-homology domain, CH-domain | 40 | 170 | IPR036872 | - | |
Trre2g04309 | 1017 | PRINTS | Kinesin heavy chain signature | 595 | 612 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre2g04309 | 1017 | PRINTS | Kinesin heavy chain signature | 626 | 644 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre2g04309 | 1017 | PRINTS | Kinesin heavy chain signature | 473 | 494 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre2g04309 | 1017 | PRINTS | Kinesin heavy chain signature | 675 | 696 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre2g04309 | 1017 | FunFam | Kinesin-like protein KIN-14I isoform A | 395 | 767 | - | - | |
Trre2g04309 | 1017 | SMART | kinesin_4 | 398 | 733 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre2g04309 | 1017 | Gene3D | Kinesin motor domain | 395 | 766 | IPR036961 | - | |
Trre2g04309 | 1017 | Pfam | Kinesin motor domain | 406 | 724 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre2g04309 | 1017 | ProSiteProfiles | Calponin homology (CH) domain profile. | 37 | 159 | IPR001715 | GO:0005515 | |
Trre2g04309 | 1017 | Coils | Coil | 739 | 759 | - | - | |
Trre2g04309 | 1017 | SMART | ch_5 | 39 | 157 | IPR001715 | GO:0005515 | |
Trre2g04309 | 1017 | MobiDBLite | consensus disorder prediction | 953 | 1000 | - | - | |
Trre2g04309 | 1017 | CDD | CH_AtKIN14-like | 39 | 156 | - | - | |
Trre2g04309 | 1017 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 44 | 969 | IPR027640 | GO:0003777|GO:0007018 | |
Trre2g04309 | 1017 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 400 | 757 | IPR027417 | - | |
Trre2g04309 | 1017 | CDD | KISc_C_terminal | 398 | 727 | - | - | |
Trre2g04309 | 1017 | MobiDBLite | consensus disorder prediction | 953 | 1017 | - | - | |
Trre2g04309 | 1017 | ProSiteProfiles | Kinesin motor domain profile. | 400 | 725 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g04309 | Trre-Chr2 | 50626258 | 50632009 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g04309 | 388 | 725 | Calmodulin-binding Proteins | AT5G65930 | 42.442 | 3.82e-77 | 274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g04309 | K10406 | - | gmx:100801279 | 1649.8 |