Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04264 ATGGCGTCGAGTCAACAACGACCTGTAAGTTCAGGATCGGACGGCGGAGATCTACAAATTGACGAAAGGAAAAGAAAGAGAATGTTATCTAACCGTGAATCCGCGAAACGATCGAGGATGAGAAAGCAGAAACAGATTGAAGATCTGACTGAAGAAGCTGGTAGATTGCAAATCGAGAATGATCGTGTGGCGAAGAGGATAAAAGCGAAGGAAGATGCTTATGTGGAGATGGAAGCTGCAAATAATGTTATCAGAGCACAGACTATGGAATTGGCTGAACGATTACGGTTTCTGAATTCGGTTATTGATGTTGCTGAAGATGTTAATGGTTTTTCTGTTGAAATGGCTATGATTCCTGATCCTCTTCTTAAACCTTGGTTCATTCCGCATTATTATTCAGCATCACAGGATATGTTGCTGCGTTGA 426 0.4178 MASSQQRPVSSGSDGGDLQIDERKRKRMLSNRESAKRSRMRKQKQIEDLTEEAGRLQIENDRVAKRIKAKEDAYVEMEAANNVIRAQTMELAERLRFLNSVIDVAEDVNGFSVEMAMIPDPLLKPWFIPHYYSASQDMLLR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04264 141 CDD bZIP_plant_GBF1 24 74 IPR045314 GO:0003700|GO:0006355
Trre2g04264 141 FunFam BZIP transcription factor 21 72 - -
Trre2g04264 141 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Trre2g04264 141 Coils Coil 32 66 - -
Trre2g04264 141 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Trre2g04264 141 Gene3D - 21 103 - -
Trre2g04264 141 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 68 IPR004827 GO:0003700|GO:0006355
Trre2g04264 141 Pfam bZIP transcription factor 23 80 IPR004827 GO:0003700|GO:0006355
Trre2g04264 141 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Trre2g04264 141 MobiDBLite consensus disorder prediction 17 46 - -
Trre2g04264 141 MobiDBLite consensus disorder prediction 1 46 - -
Trre2g04264 141 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04264 Trre-Chr2 50192537 50192962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04264 21 139 bZIP Transcription Factor Family AT3G62420 47.541 1.47e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre2g04264 bZIP_1 4.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04264 K25786 - gmx:780550 175.252