Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04255 ATGTTGTTAATTTCATTATTCATTCAAAGCTTTAAAAGAGTGAAAACTCCTGAGAGACGAGAACCTACAACAACACCATTGAGTACTTTAGACCGAGGAAGACATTCAAATTTGGTTGCTATCCTTGGAATTGTTACGGGGATACTCATCATTTCCATTATATGTGTACTTATACTTTGTTTATGCACGTTGAGGCCAAAGACGAAAACACCTCCTATAGAAACTGAAAAGCCAAGAATAGAACATGCAATTTCATTTGTTGTTGGCTCAATTTCACATCCAACAAGTACACGTTTTATTTCTTATGAAGATCTTAGAGAAGCAACAAACAATTTTGAACCGGCAAGCATACTTGGAGAAGGAGATTTTGGTAGAGTTTTTAAAGGTGTCTTGAATGATGGAACTGCTGTTGCAATTAAGAGGCTTACTAGTGGCCGGGCAGCAGGCAATCGTGACTCATCACAAAACCTACTTTGCTATGAGCTTGTCCCAAATGGAAGTTTGGAGACCTGGCTTCATGGTCCCTTGGGAATAAATTGCCCTTTGGATTGGGACACCAGGATGAAGATTGCTCTTGATGCTGCAAGAGGACTTTCTTACCTGCATGAAGATTCACAGCCGTGTGTCATACACAGAGATTTCAAGGCATCTAATATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCTGATTTTGGTCTAGCTAAACTTGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGAGTCATGGGCACATTTGGGTATGTAGCACCGGAGTATGCTATGACTGGACACCTACTCGTTAAAAGCGACGTTTATAGCTATGGGGTTGTCTTGCTAGAACTGTTGACCGGAAGGAAACCTGTGGATATGTCACAGCCAACTGGACAAGAGAACCTTGTGACTTGGGCTAGGCCAATTCTTAGAGATAAGGAGCGGGTAGAAGAACTTGCTGATCCAAGGCTTGGGGGAAGGTATCCGAAGGAAGATATTGTCTGTGTTTGCACTATCGCTGCAGCCTGTGTTGCACCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTAGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAAAATCATGATCCTGCATTACGGACATCCATTACAAGGCCTAACATGAGACAGTCCTCTACCACCGATGATTCTGACGGATCATCTTCAATGTGTTCTTCTGGTCCTCACTCTGGTCTAAGTGCCTTTGACTATGACAACATTTCTAGGACAGCTGTTTTCTTTGAAGATCTTCATGAAGGGCGGTGA 1290 0.4271 MLLISLFIQSFKRVKTPERREPTTTPLSTLDRGRHSNLVAILGIVTGILIISIICVLILCLCTLRPKTKTPPIETEKPRIEHAISFVVGSISHPTSTRFISYEDLREATNNFEPASILGEGDFGRVFKGVLNDGTAVAIKRLTSGRAAGNRDSSQNLLCYELVPNGSLETWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKLAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKERVEELADPRLGGRYPKEDIVCVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITENHDPALRTSITRPNMRQSSTTDDSDGSSSMCSSGPHSGLSAFDYDNISRTAVFFEDLHEGR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04255 429 SUPERFAMILY Protein kinase-like (PK-like) 91 362 IPR011009 -
Trre2g04255 429 Gene3D Transferase(Phosphotransferase) domain 1 163 382 - -
Trre2g04255 429 PANTHER OS01G0750732 PROTEIN 34 387 - -
Trre2g04255 429 ProSiteProfiles Protein kinase domain profile. 112 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g04255 429 Gene3D Phosphorylase Kinase; domain 1 88 161 - -
Trre2g04255 429 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Trre2g04255 429 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 379 - -
Trre2g04255 429 MobiDBLite consensus disorder prediction 370 403 - -
Trre2g04255 429 Pfam Protein kinase domain 152 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g04255 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04255 Trre-Chr2 50120204 50122877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04255 15 429 Receptor kinase-like Gene Family AT4G02010 69.369 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre2g04255 Pkinase 5.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04255 - - gmx:100305437 661.759