Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04250 ATGGAGAAAAAAGAGATGGGTGTGAAGAGTGAGGAAGATGTTAATATTGATTCTTCATCTTTGTTAAACAATTATCAATTTTCAAGCGTGTTTGATTTCTGTGAGGTAGAAAAAAGCTCTGCTTTAGGGTTTATGGAGTTACTAGGTGTTCAAGATTATACTCCTCTGCTTGATGTACCTCAACTATCAGTATCAACCATGTCTATGAAAACTACTACAGTTATGGCTTCATCTGATACTGGAAAAGACTCTTCTCAGGTTTTGAACCAACAACAACCTGCAACTCCTAACTCTTGTTCGATTTCATCGGCATCTAGTGAAGCTGTTAATGATAATAAGCCTCTTGTTGAACTTGAACAAACTGAAGAAGATGATGAAGGAGATGCAGATGAAAAGCACCAAAAGTCCAACAAACAGTTGAAGACGAAGAAAACAAATCAAAAGAAACAGAGAGAACCAAGATTTGCATTCATGACAAAAAGTGAGGTGGATCATTTAGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTAAAAAACAGCCCCTTTCCAAGGAGCTACTATCGTTGCACCACTGTTTCATGTAATGTGAAGAAACGTGTTGAACGTTCTTTTACTGATCCAAGTATTGTAGTAACAACTTATGAAGGCCAACACACTCATCCAAGTCCAGCTATGTCGCGTTCCGCCTTCATCGGAACTCAAATAGCACCATCGGCCGGTTTAGTCTCCGGTGGATTTCCTACTAACTATGGCTCCGTTTTGCAAGGAAACTACTTATCCTCACCATCATCACAGTATCATCAGCAACAACAACATCAACATCAACAACTACTTGTTAATACATTGTCCTCTATGAATCATCCTTATAACAATTCTTCAGATTTTACTCAAGAGAGAAAGCTTTGTAATCAAGTGACAACTGCTGCATTTCTTAGGGATCATGGACTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG 999 0.3844 MEKKEMGVKSEEDVNIDSSSLLNNYQFSSVFDFCEVEKSSALGFMELLGVQDYTPLLDVPQLSVSTMSMKTTTVMASSDTGKDSSQVLNQQQPATPNSCSISSASSEAVNDNKPLVELEQTEEDDEGDADEKHQKSNKQLKTKKTNQKKQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTVSCNVKKRVERSFTDPSIVVTTYEGQHTHPSPAMSRSAFIGTQIAPSAGLVSGGFPTNYGSVLQGNYLSSPSSQYHQQQQHQHQQLLVNTLSSMNHPYNNSSDFTQERKLCNQVTTAAFLRDHGLLQDVVPSHMLKEE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04250 332 ProSiteProfiles WRKY domain profile. 161 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g04250 332 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 278 IPR044810 GO:0003700
Trre2g04250 332 MobiDBLite consensus disorder prediction 75 110 - -
Trre2g04250 332 MobiDBLite consensus disorder prediction 75 153 - -
Trre2g04250 332 Gene3D WRKY domain 151 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre2g04250 332 SUPERFAMILY WRKY DNA-binding domain 158 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre2g04250 332 PIRSF WRKY_txn_fact_IIc 1 332 IPR017396 GO:0003700
Trre2g04250 332 SMART WRKY_cls 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g04250 332 FunFam WRKY transcription factor 57 152 226 - -
Trre2g04250 332 Pfam WRKY DNA -binding domain 167 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04250 Trre-Chr2 50031262 50032795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04250 29 332 WRKY Transcription Factor Family AT2G47260 49.401 5.62e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre2g04250 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04250 - - gmx:732591 382.104