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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trre2g04215
ATGAAGAGTTACCAAAAAAAGACCATATTGGAAAAGAAATATCGGAATGTGAGTGCCATTGGGCAGGGTCTTGATTTGAAGCTGAGGCAAGCTGAGAGTAAGAAAATTAGAGTGACTGTTAGCCAAAATGGTGCTGCTGATTTTAAGAGCATTACAGAAGCTATTAATAGCATTTCACCACACAATACTAGAAGAGTTATTTTGTTGATTGCGCCCGGTGTTTATAGGGAGAAAGTTGTGATCCCCAAAACATTGCCTTTCATAACATTCTTAGGGGATGCAAGGGATCTACCAACTATTACTGGAAATGATACAGCGTCTGTTACGGGAAGCGATGGTTCTCTATTGAGGACGTTCAATAGTGCGACCGTTGCTGTGAATGCTAGCTATTTTATAGCCATCAACATTAAATTTGAGAACACTGCTTATATTCCCATTGGATCAGAAGTAGACCAAGCTGTTGCGCTTCGCGTCACCGGAACCAAAGCTGCTTTTTACAATTGCTCCTTTTATGGGGTTCAAGACACATTATATGATCACAAAGGCCTTCACTACTTCAAAAATTGCTTTATTCAAGGCTCGGTTGATTTCATCTTCGGCTATGGAAGGTCCCTTTATGAGGGTTGCACTATAAACTCCATAACCAAGAACATGACCTCCATCACAGCTCAAAAGCGTTCGAGTTCATCATTAGATAGTGGATTTTCCTTTAAAAATAGCACAGTAACAGGTAGTGGACAAGTTTACCTTGGAAGACCATGGGGAGATTATTCGAGAGTCGTTTTCTCTTACACTTTCATGGACAAGATTGTTCTCCCCAAAGGATGGAAAGATTGGGAAGACCAAAAGCGCTTCATGAATGTATATTATGGAGAATACAAGTGTAGTGGGCCTGGATCCAACTTCACCGGAAGAGTTCCATGGGCACGGATACTAACGGACGAAGAGGCCCAACCTTTTATTGGAATCCATTTCATTGAAGGGGAGACTTGGCTTATTATTAGCCCTTAA
1011
0.4125
MKSYQKKTILEKKYRNVSAIGQGLDLKLRQAESKKIRVTVSQNGAADFKSITEAINSISPHNTRRVILLIAPGVYREKVVIPKTLPFITFLGDARDLPTITGNDTASVTGSDGSLLRTFNSATVAVNASYFIAINIKFENTAYIPIGSEVDQAVALRVTGTKAAFYNCSFYGVQDTLYDHKGLHYFKNCFIQGSVDFIFGYGRSLYEGCTINSITKNMTSITAQKRSSSSLDSGFSFKNSTVTGSGQVYLGRPWGDYSRVVFSYTFMDKIVLPKGWKDWEDQKRFMNVYYGEYKCSGPGSNFTGRVPWARILTDEEAQPFIGIHFIEGETWLIISP
336
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trre2g04215
336
FunFam
Pectinesterase
33
334
-
-
Trre2g04215
336
Gene3D
-
32
334
IPR012334
-
Trre2g04215
336
Pfam
Pectinesterase
38
328
IPR000070
GO:0030599|GO:0042545
Trre2g04215
336
SUPERFAMILY
Pectin lyase-like
36
332
IPR011050
-
Trre2g04215
336
PANTHER
ACYL-COA THIOESTER HYDROLASE YBHC-RELATED
29
332
-
-
Trre2g04215
336
ProSitePatterns
Pectinesterase signature 2.
191
200
IPR033131
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trre2g04215
Trre-Chr2
49557735
49564954
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trre2g04215
38
332
Carbohydrate Esterase
AT5G47500
47.475
1.21e-96
289
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trre2g04215
K01051
-
qsu:112011696
486.493
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