Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04192 ATGGTGGCTGAAGCAGAGGTTGTGTGTCAACAAAGCGTGGATGTGTTAGATGTGAAGTATTTTCCGAATAAAGGAAGCAATATTCATGAGATCGGTGATGGAGATGTTATCTCGCCATCGAATTTTGAGAAAGTTCGAGTTTCTGAATCAGTTTCTGCTGAGTTACTTACTTCAAAAGAAGATGTTAAGACTGCAGACATAATCTCAGAAGCTGCTCTTGAATCTGCGGTTCTGCAATTCGTCCCCTGCATCCGTTCTGGTAGTTTTGCTGACATTGGTCCGCGTAGATACATGGAAGATGAACATATAAGAATAGATGATTTGTCTTCTAATCTGGGATCACTATATAATTTTCCTAAACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATAAGAAAAAATGTTATAAAATTCTTCTTTGAAGATGTCAATTTCCCTCAGACATCTGAAGTTGATAACATATTTTTACAAGAGGTGGAGAATTCCCTCAGAAAGGCTTTTCTTTTGGCAGATTCAGCTTTGGCTGATGATTGCAGTGTAAACACCTCATCAGGGACCACAGCTCTTACTGCTATGATATTTGGAAGGCTTCTAATGGTGGCTAATGCCGGTGACTGTCGAGCAGTTCTCAGTCATAAAGGAGAGGCCATTGACATGTCTCAAGATCACCGACCTATTTATCCATCAGAACGGAGGCGAGTTGAAGAATTGGGTGGTTATGTAGAGGATGGTTATCTTAATGGCGTTTTATCAGTTACAAGAGCACTAGGAGACTGGGATATGAAGTTACCTAGGGGTGCTCCCTCACCATTGATTGCAGAGCCTGAGTTCCGCCAAATGGTTCTAACAGAGGACGACGAATTCCTCATCATTGGATGTGATGGCATCTGGGATGTCATGACAAGTCAGCATGCCGTTAGCCTTGTTCGTAAAGGTTTGAGGAGGCATGATGACCCAGAGAAGTGCGCCAGGGACCTAGTTATGGAGGCATTACGCCTCAACACATTCGACAATCTGACAGTGATCATTGTCTGTCTCTCTTCCCTCGACCACGGGGAGTCAGAGTCATCACCACCTCCCCAGCGGAAATTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGTTTGAGAAACCTGTTGGAAGGAAGTGCTAGCAACTGA 1191 0.44 MVAEAEVVCQQSVDVLDVKYFPNKGSNIHEIGDGDVISPSNFEKVRVSESVSAELLTSKEDVKTADIISEAALESAVLQFVPCIRSGSFADIGPRRYMEDEHIRIDDLSSNLGSLYNFPKPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVNFPQTSEVDNIFLQEVENSLRKAFLLADSALADDCSVNTSSGTTALTAMIFGRLLMVANAGDCRAVLSHKGEAIDMSQDHRPIYPSERRRVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGAPSPLIAEPEFRQMVLTEDDEFLIIGCDGIWDVMTSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCLSSLDHGESESSPPPQRKLRCCSLSAEALCSLRNLLEGSASN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04192 396 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Trre2g04192 396 Gene3D - 74 361 IPR036457 -
Trre2g04192 396 SMART PP2C_4 75 353 IPR001932 -
Trre2g04192 396 CDD PP2Cc 84 355 IPR001932 -
Trre2g04192 396 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Trre2g04192 396 PANTHER PROTEIN PHOSPHATASE 2C 70 353 IPR015655 GO:0004722|GO:0006470
Trre2g04192 396 FunFam Probable protein phosphatase 2C 22 69 358 - -
Trre2g04192 396 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Trre2g04192 396 SUPERFAMILY PP2C-like 79 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04192 Trre-Chr2 49299274 49301594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04192 98 392 PP2C-type Phosphatase Gene Family AT3G62260 70.270 3.23e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04192 K14803 - gmx:100819791 708.368