Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04160 ATGATTTGCAACTCTGATGTAGAACTAGTGAAGGAGATTTTATCAAATAAATTTGGTTTCTATCCAAAACGCAAAGCAAGGCGCCCTTCTGTAGTAACACTAGTAGGAGAAGGGTTAGCTCTTATGGAAGGTGAAGAGTGGGTTAGGCGCAGAAGGATACTCAATCCTGCTTTCTCCATGGATAAACTCAAGATTATGATAAGTAGAATGGCAGCATGTACAATTTCCATGGTAGATGAGTGGAAAAGAAAAGCCACTGAAGCAAAGGATAAATCAAAGACAATAGAGATGAGTGAAGAATTTCAAGAGCTAACATCAAATATAATCGCTCACACTGCCTTTGGTACCAGTTTTGCTCATGGAAGAGATGCCTTTAAAGCACAAACAGAACTTCAATTGCATTGTGCAGCTTCAAGTTCTGATGTTTTCATTCCTGGCTCACAATACTTACCTACTAAGTCAAACTTAGAGATTTGGAAGCTTGATAGGAAAATGAAGAAATCATTAAAATGCATTATTGAAAGTAGGTTGAATTCTCAATCAGATAATTGCTCTTATGGAGATGATTTACTAGGAGTGATGATGGATACAAAGAATGATGGTCCTAATAAGTTGAAGATGAATGAAATCATGGAAGAATGCAAAACCTTTTTCTTTGCTGGTCAAGAAACCACTTCAAACTGGCTTGTTTGGACTGTCTTTTTGTTGAGTATGCATAAGGATTGGCAAGAGAAACTTAGACAAGAGATCTTGGAGATTTGTGGCATGGAAATTCCTGATGCAGATATGCTATCAAAGTTAAAAATGGTGAACATTGTGTTGCTGGAATCATTAAGGCTGTATTGTCCTACAATAGAACTAGAAAGAATGGCTTCAAAAGACATGAAATTAGGAAATTTGATGATACCCAAAGGAACATGTCTCAGATTTCCAATTATAATGATTCACAGAAATACAAAATATTGGGGTGAAGATGCAAATGAGTTCAATCCAATGAGATTCATTAACGGAGTATCTAAAGCTGCAAATCACCCAAATGCTCTACTTGCATTTTCTGTAGGTCCAAGAAATTGCATTGGTCAGAATTTTGCTATGTTAGAAGCTAAGACAGTGATGACTCTAATTCTTCAAAGGTTTTCTTGGTCTCTTTCCCCTAACTATGAACATGCACCTGTTAACAACCTCACTTTGCAGCCACAACATGGTCTTCCCATCATTATAAAACCATTGCAGTTGTAA 1239 0.3672 MICNSDVELVKEILSNKFGFYPKRKARRPSVVTLVGEGLALMEGEEWVRRRRILNPAFSMDKLKIMISRMAACTISMVDEWKRKATEAKDKSKTIEMSEEFQELTSNIIAHTAFGTSFAHGRDAFKAQTELQLHCAASSSDVFIPGSQYLPTKSNLEIWKLDRKMKKSLKCIIESRLNSQSDNCSYGDDLLGVMMDTKNDGPNKLKMNEIMEECKTFFFAGQETTSNWLVWTVFLLSMHKDWQEKLRQEILEICGMEIPDADMLSKLKMVNIVLLESLRLYCPTIELERMASKDMKLGNLMIPKGTCLRFPIIMIHRNTKYWGEDANEFNPMRFINGVSKAANHPNALLAFSVGPRNCIGQNFAMLEAKTVMTLILQRFSWSLSPNYEHAPVNNLTLQPQHGLPIIIKPLQL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04160 412 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 402 - -
Trre2g04160 412 Pfam Cytochrome P450 5 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 Gene3D Cytochrome P450 1 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 351 360 IPR017972 GO:0005506|GO:0016705
Trre2g04160 412 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS P450 superfamily signature 220 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS P450 superfamily signature 272 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS P450 superfamily signature 349 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 SUPERFAMILY Cytochrome P450 2 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS E-class P450 group I signature 229 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS E-class P450 group I signature 209 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS E-class P450 group I signature 358 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS E-class P450 group I signature 348 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS E-class P450 group I signature 104 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04160 412 PRINTS E-class P450 group I signature 312 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04160 Trre-Chr2 49013148 49016226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04160 2 411 Cytochrome P450 AT2G46960 56.595 1.26e-168 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04160 K20660 - aprc:113872106 632.098