Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04153 ATGAAGTTGCTGATTTTGTTTGCAGCTCAATTTGCATTCTTAGTTTCTGGGTTTATCTCCTCTGAATCTGAGACATTATTTTCTTTCTCACAAAATGATTTTGTTTCAGCTAATCAATTGGAACCTCTTATGGTTAACCTCACTCTCATTCAAGGAGCTGATTCCAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTTCAAATAGTTGGCTTATTCACCTGGAGGGAGGAGGATGGTGTAACACTATTAGAAACTGTGTCTACAGAAAAAAGACTCCTCGTGGTTCCTCAATATACATGGAAAATCGAATACCATTTACAGGAATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGCGATGGAGCGTCTTTTAGTGGAGATAGTGAAAATGAGGCTGCGGGGCTTCAATTCCGTGGACAAAGAATATGGTTAGCTGCAATGGAGGAATTAATGTCTCAAGGAATGCAGAATGCAGAACAGGCTCTTCTTTCTGGATGCTCCGCGGGTGGTCTAGCATCCATAATACATTGTGATGAGTTCCAAAGCTTGTTACCAAAACCTTCCAAAGTGAAGTGTATTAGTGATGCAGGATTTTTTCTCGATGCAATTGATGTATCTGGAGGACGGTCACTGAGGGATCTGTTTGGAGGCGTTGTTCAGTTACAGGAAGTTCACAAAAATCTGCCAAAAAGTTGTATAAGCCGACTGGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGGTAGAACATGTGGAGACACCACTGTTTCTACTCAACGCGGCTTATGATGTGTGGCAGGTCCGATCAAGTTTAGCCCCGGCCACAGCTGATCCCCTTGGCACTTGGAATGACTGCAAATCAAACCATGCAGAGTGTAACTCGTCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTTGAGGACGTGAAAGACTTCTCAAAGTCGTCTCAAACTGGACTATTCATAAATTCTTGTTTTTCTCATTGCCAGTCTGAGAGACACGAGCTATGGTTCGCCGATAACTCTCCTCTTATCGATGACAAGCCAATTGCAGTTGCAGTAGGAGACTGGTTTTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTCCTTACCCTTGTGACAACAGCTGCCATAATCTGGTTTTTAAATGA 1227 0.4197 MKLLILFAAQFAFLVSGFISSESETLFSFSQNDFVSANQLEPLMVNLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGSNSWLIHLEGGGWCNTIRNCVYRKKTPRGSSIYMENRIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSENEAAGLQFRGQRIWLAAMEELMSQGMQNAEQALLSGCSAGGLASIIHCDEFQSLLPKPSKVKCISDAGFFLDAIDVSGGRSLRDLFGGVVQLQEVHKNLPKSCISRLDPTSCFFPQNLVEHVETPLFLLNAAYDVWQVRSSLAPATADPLGTWNDCKSNHAECNSSQIQFLQDFRNQMLEDVKDFSKSSQTGLFINSCFSHCQSERHELWFADNSPLIDDKPIAVAVGDWFFDREVVKAIDCPYPCDNSCHNLVFK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04153 408 PANTHER NOTUM-RELATED 42 404 IPR004963 GO:0016787
Trre2g04153 408 Pfam Pectinacetylesterase 41 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04153 Trre-Chr2 48946560 48950389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04153 4 408 Carbohydrate Esterase AT1G57590 65.122 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04153 K19882 - gmx:100786972 699.123