Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04152 ATGAAAATGAAGTTGCTGATTTTGTTTGCAGCTCAATTTGCATTCTTAGTTTCTGGGTTTATCTCCTCTGAATCTGAGACATTATTTTCTTTCTCACAAAATGATTTTGTTTCAGCTAATCAATTGGAACCTCTTATGGTTAACCTCACTCTCATTCAAGGAGCTGATTCCAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTTCAAATAGTTGGCTTATTCACCTGGAGGGAGGAGGATGGTGTAACACTATTAGAAACTGTGTCTACAGAAAAAAGACTCCTCGTGGTTCCTCAATATACATGGAAAATCGAATACCATTTACAGGAATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGCGATGGAGCGTCTTTTAGTGGAGATAGTGAAAATGAGGCTGCGGGGCTTCAATTCCGTGGACAAAGAATATGGTTAGCTGCAATGGAGGAATTAATGTCTCAAGGAATGCAGAATGCAGAACAGGCTCTTCTTTCTGGATGCTCCGCGGGTGGTCTAGCATCCATAATACATTGTGATGAGTTCCAAAGCTTGTTACCAAAACCTTCCAAAGTGAAGTGTATTAGTGATGCAGGATTTTTTCTCGATGCAATTGATGTATCTGGAGGACGGTCACTGAGGGATCTGTTTGGAGGCGTTGTTCAGTTACAGGAAGTTCACAAAAATCTGCCAAAAAGTTGTATAAGCCGACTGGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGGTAGAACATGTGGAGACACCACTGTTTCTACTCAACGCGGCTTATGATGTGTGGCAGGTCCGATCAAGTTTAGCCCCGGCCACAGCTGATCCCCTTGGCACTTGGAATGACTGCAAATCAAACCATGCAGAGTGTAACTCGTCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTTGAGGACGTGAAAGACTTCTCAAAGTCGTCTCAAACTGGACTATTCATAAATTCTTGTTTTTCTCATTGCCAGTCTGAGAGACACGAGCTATGGTTCGCCGATAACTCTCCTCTTATCGATGACAAGCCAATTGCAGTTGCAGTAGGAGACTGGTTTTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTCCTTACCCTTGTGACAACAGCTGCCATAATCTGGTTTTTAAATGA 1233 0.4185 MKMKLLILFAAQFAFLVSGFISSESETLFSFSQNDFVSANQLEPLMVNLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGSNSWLIHLEGGGWCNTIRNCVYRKKTPRGSSIYMENRIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSENEAAGLQFRGQRIWLAAMEELMSQGMQNAEQALLSGCSAGGLASIIHCDEFQSLLPKPSKVKCISDAGFFLDAIDVSGGRSLRDLFGGVVQLQEVHKNLPKSCISRLDPTSCFFPQNLVEHVETPLFLLNAAYDVWQVRSSLAPATADPLGTWNDCKSNHAECNSSQIQFLQDFRNQMLEDVKDFSKSSQTGLFINSCFSHCQSERHELWFADNSPLIDDKPIAVAVGDWFFDREVVKAIDCPYPCDNSCHNLVFK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04152 410 Pfam Pectinacetylesterase 43 390 IPR004963 GO:0016787
Trre2g04152 410 PANTHER NOTUM-RELATED 44 406 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04152 Trre-Chr2 48946554 48950389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04152 6 410 Carbohydrate Esterase AT1G57590 65.122 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04152 K19882 - gmx:100786972 700.664