Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04105 ATGCCAATAAGAAAGCATTCAACACCAGCAAGCCAACCGCACCAACAACACAACAACCCTAATCCACCACCACCTAATCAACAACCCTTCTGCCTCCACTTCGTCAACACGGGATTTTGTCGTTACGCCGATTCTTGCAAATATTTTCATCCCAATCCCAACAACAATATACAGCAGCAGCAGCAGCAGCCACAACCAATGATAACCACGGCAGGGGATGTAGTTGGAGAAAGTATGGGAGTATCGTTGGGAAATTTGCCTCCGTCGCTGCAGCCTCCCCCTGAGGGTGGATACCCCCACCTTCCCTTTGTCGATTGGGGATAG 324 0.5 MPIRKHSTPASQPHQQHNNPNPPPPNQQPFCLHFVNTGFCRYADSCKYFHPNPNNNIQQQQQQPQPMITTAGDVVGESMGVSLGNLPPSLQPPPEGGYPHLPFVDWG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04105 107 Gene3D - 4 69 - -
Trre2g04105 107 ProSiteProfiles Zinc finger C3H1-type profile. 25 53 IPR000571 GO:0046872
Trre2g04105 107 PANTHER NUCLEASE-RELATED 26 107 - -
Trre2g04105 107 MobiDBLite consensus disorder prediction 79 107 - -
Trre2g04105 107 MobiDBLite consensus disorder prediction 1 30 - -
Trre2g04105 107 SUPERFAMILY CCCH zinc finger 27 53 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04105 Trre-Chr2 48563058 48563554 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trre2g04105 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04105 K13152 - gmx:100527203 107.842