Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04104 ATGCTCGTGCCTCCAATCAGATCCAGATGCTCATTCATGTGCTCCTTTGGTCAAGTGAATGGCAAATCAGCTGGGAATTCAAATTGTTTTCAAGACTTTGAAAAGGTACTAACTGATTTGCTATACTTGATGCGTGTTACGGAAAGTGTAATCCAAACACGAGTTTCCTCGGCTCTTGCTCATCTTTGTTCATTGGATGATCTTAAAACAGTCTTTATAGATAACAACGGTAAACAATTCAATTATCTGAATTCTATTGTTGACATGGAAAATGCCAATAAGAAAGTATTACTGCGAGTATTGCGAAAAGCAATTTCAAGACACTCCATCAGATCGGAAACGACACAATGCAGGCATTCAACACCAGCAAGCCAACCGCACCAACAACACAACAACCCTAATCCACCACCACCTAATCAACAACCCTTCTGCCTCCACTTCGTCAACACGGGATTTTGTCGTTACGCCGATTCTTGCAAATATTTTCATCCCAATCCCAACAACAATATACAGCAGCAGCAGCAGCAGCCACAACCAATGATAACCACGGCAGGGGATGTAGTTGGAGAAAGTATGGGAGTATCGTTGGGAAATTTGCCTCCGTCGCTGCAGCCTCCCCCTGAGGGTGGATACCCCCACCTTCCCTTTGTCGATTGGGGATAG 663 0.4419 MLVPPIRSRCSFMCSFGQVNGKSAGNSNCFQDFEKVLTDLLYLMRVTESVIQTRVSSALAHLCSLDDLKTVFIDNNGKQFNYLNSIVDMENANKKVLLRVLRKAISRHSIRSETTQCRHSTPASQPHQQHNNPNPPPPNQQPFCLHFVNTGFCRYADSCKYFHPNPNNNIQQQQQQPQPMITTAGDVVGESMGVSLGNLPPSLQPPPEGGYPHLPFVDWG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04104 220 PANTHER NUCLEASE-RELATED 125 220 - -
Trre2g04104 220 Gene3D - 105 182 - -
Trre2g04104 220 MobiDBLite consensus disorder prediction 110 141 - -
Trre2g04104 220 ProSiteProfiles Zinc finger C3H1-type profile. 138 166 IPR000571 GO:0046872
Trre2g04104 220 SUPERFAMILY CCCH zinc finger 140 166 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04104 Trre-Chr2 48563058 48567501 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trre2g04104 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04104 K13152 - gmx:100527203 107.842