Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04083 ATGTCCGACGACAAACCCGCCACAGACCAATACGGCGTCCTCCTCTATTACAACTACGTCGATATTCCAAATCTTGACGACCTCCTCACATTCTACCGTTCCAATTGCTCCTCTCTCTCCCTTCTCGGCCGTGTTCGCCTCTCTTCCCACGGCGTCAATGTCACCGTTGGTGGCAATTTATCCTCTTTGCAACGACACATTGAAGACCTCAAAGCTAATAGTAATTTATTTCATGGAACTGATTTCAAGCTTGCAACTTGTCATCAACCGTTAAACGACGATGTTGCTAAGGAGTGTGGATTCACTTCACTCTCAATTCGAATTGTCAAGGAACTTGTTACTCTGAGTTCTCATCCACTATTGAAGTCACCAGAAATTTCCAATGCTGGAAGACATTTATCAGCACTTGAGTTTCACTCAACCCTTCACAATGCTAATAAGGAGGGTCCAGAAAACAGTCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGGATTGGGAAGTTTCATGCACCAAATGTTGAAACTCTGGATCCACAGGTTAGGCAGTACAGTGATTTCTCCTCGTGGATAGACGATAGAGGCGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACCGGTGGAATCAGGTGCGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTATTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAGGTTCAGATGCTAGTACAATTGGTACCTGTCTTATATGTCAATGTTCCTTTGACGATTACTCTTCACGCTGTCGATGTACTTATTGCAGAATGCTAGTCTTGGTTTGCCATAGTTGCCAGAATGAATCTGCGCTGTACGTTTGTGAGCTATGCCAAAAACAGGGTAAGGCTGCTGGGTCAAAGCAGTTAATTGAAAATGATGATTCAAAAAAATCTCTGCCAGGTGATGAGTTCCAGAATTTATCTTCAGATACTATGCTCTTGCCTCAAGCAGCTAGAGGGGATGACGTAAGCACCTCAAGAAAACTTAGAATCTTATGCTTGCACGGGTTTCGACAGAATGCTTCCAATTTTAAGGGAAGAACGGCATCATTAGCCAAAAAACTCAAGAAAATTGCTGAATTTGTTTTTATAGACGCACCTCATGAAGTGCCCTTCATTTATCAAACACCAGTGCCAGTGCCCCATGTGAATGGTGCATCGTCCTCTTTGCCAGCTAGTCCACCTCCACGTATGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTAGCACCCGATTTTGATGGAAGTAGTGGTGTTGAGTGGAAGGTAGCAGACGGTCCATTTGATCCACTTCAATACCAGCAACAAACTGGTGGATACGATATTTCAATATCACACATAGAGAACGTGTTCTCCCAAGAAGGGCCATTTGATGGAATCTTGGGTTTTTCACAGGGAGCAGCAATGACTGCGGTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTTAAATTTGTAGTCTTGTGCTCAGGCTTTGCTCTGCATTTGAAGGAGATGGAGTGTAGCCCTATCAAGTGTCCTTCTCTTCATATTTTTGGTAACGAACATGGTCAAGACAGACAGATAGCCAACCAAACTAGCAAGGAACTTGCTTCTCTATATGACAGTGATTGTTCTGTAATCGTTGAACATGACTGTGGTCATATAATTCCTACTCGGTCCCCATATATTGACGAGATCAAGGCTTTCCTTGGGCGATTTCTGTAA 1833 0.4255 MSDDKPATDQYGVLLYYNYVDIPNLDDLLTFYRSNCSSLSLLGRVRLSSHGVNVTVGGNLSSLQRHIEDLKANSNLFHGTDFKLATCHQPLNDDVAKECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSALEFHSTLHNANKEGPENSLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDFSSWIDDRGEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGYFKGKNFVFDHRISVGGSDASTIGTCLICQCSFDDYSSRCRCTYCRMLVLVCHSCQNESALYVCELCQKQGKAAGSKQLIENDDSKKSLPGDEFQNLSSDTMLLPQAARGDDVSTSRKLRILCLHGFRQNASNFKGRTASLAKKLKKIAEFVFIDAPHEVPFIYQTPVPVPHVNGASSSLPASPPPRMENCKKKFAWFVAPDFDGSSGVEWKVADGPFDPLQYQQQTGGYDISISHIENVFSQEGPFDGILGFSQGAAMTAVISAQQEKLKGKMDFKFVVLCSGFALHLKEMECSPIKCPSLHIFGNEHGQDRQIANQTSKELASLYDSDCSVIVEHDCGHIIPTRSPYIDEIKAFLGRFL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04083 610 SMART rhod_4 140 247 IPR001763 -
Trre2g04083 610 Gene3D - 122 277 IPR036873 -
Trre2g04083 610 Pfam Serine hydrolase (FSH1) 366 601 IPR005645 -
Trre2g04083 610 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 120 278 - -
Trre2g04083 610 FunFam esterase OVCA2 isoform X6 364 610 - -
Trre2g04083 610 Gene3D alpha/beta hydrolase 363 610 IPR029058 -
Trre2g04083 610 ProSiteProfiles Rhodanese domain profile. 150 250 IPR001763 -
Trre2g04083 610 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 5 609 IPR020936 -
Trre2g04083 610 Gene3D - 1 113 - -
Trre2g04083 610 SUPERFAMILY alpha/beta-Hydrolases 364 610 IPR029058 -
Trre2g04083 610 FunFam Rhodanese-like domain-containing protein 6 2 113 - -
Trre2g04083 610 Pfam Rhodanase C-terminal 252 317 IPR022111 -
Trre2g04083 610 Pfam UPF0176 acylphosphatase like domain 12 111 IPR040503 -
Trre2g04083 610 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 120 264 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04083 Trre-Chr2 48337069 48340746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04083 9 610 Sulfurtransferasese or Rhodanese AT1G09280 62.541 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04083 - - mtr:25484701 1157.9