Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04028 ATGAAGAAAAGACATTCCAAGGGAAGTTTCCTTAGCTTCTTTGATTGGAATGATAAATCTCAAAAGAAGCAATTTTGTCACATTCCTAAGTTACCTGATGTTTCAAACCAAGCAAAGGAAAACATGAAAATCATGCCAATGCCACAGATAAAAATAGATGAGAATGGAGAAAATACTACTTATATTGCAAGTAGTGATTTTAACTTTGCCTTATCAATTCATAGTGATGAAGAATGTGGGACTAATAAATCCCTAGGGCTAGTAGCCAGACTCATGGGTTTGGATTCACTTCCTGAAGTTCCAAATGTTTCTCTTGAATATTCTCAGTTTCATGAGATTAATCTTCATTCAATGGCTCACTATTGCAATGTAGATTCCACAAACACAACACTTAAGTCGAACAAGTCTTTTTCGCGTGCCATTGAATCATCGACAATGAATAAATGTCAAAATGAAACTTTGCATCCAAGGTCTGCTAAACCTATTTCAGTTACTTGCAATAAAATTTTGTCTCCTATCAAATGTCATGGTTATATGCAATCTAAGAATGCATCATATATAAAGGGGGAAGATGATAAGATCATTGAGGCGAGTCGCCAATCATATATGAGGAACAGAATGTCTTCAGTTGGTTCTTTATCTGTTCCCTTGAGAACTCTTGATTTGCAAGAGAAATTGAAAACGGCGCCACATGGATCGAAGTTCAATGTGAATGGAAAACCTACTATTAGGAGAAGCAACTCATATAAGTCTAGTCCAACGGTCATAGGTTCAAGAGATTCAGAAAATAATAATTCACGCCGAGGTAAAGGAAAATCTGGTTCGCTTGTAACATCGTCCAAAACCAATGTTCAAAGTAGGGATACATTGAATTTGAATGGAAATACGAGATACATGAAGCAGAGAAATTGTCATGGCGAAAGCAGCAATGTTCTTAGGCAGAATGGTGTGACCAACAAAGGTAAATTAACTTCAAAAGTGGACACTAATAAGCCAACACAAACCTGTTCGTCAGGAAGTTCTACTCGAGCTAGGAAGGCAACAAATAAATGTGCTGTTAATTCCAACATTGAATCCAAAAGGTCAAGCACAAGAGTAACCGATAAGCAAAAGGATTTTTCGGTATCAAAATCGGTATCAAAAAGAAAGAGTTCTTCCCAAAAGAAGAGGTATGATCAAAATGATGCACAATGTTCTGATAATGCAGTTAATACTTATGTAAGAAGGTCTATAAAATGTAATGTTACAATTGATGAAAGTCTTTACCAAGATACATTTAGTATGGAAGAAAGCAAGGATGTCATTTCATTTACATTTACATCTCCATTAAGGAAAAAAATGTCTAAGTCGCGATCCACTATTGAGCAAGCGATGAAAACAAGGACTAGTACTGATATCGATTCTTTTGATCATAGTGATAAGGTTTATCCTGAAAAATTATCATTATCTCCTACCAGGTTAGATGTTGATGAATTAAGTGTCATGTTATCTCACATTAATCCACCTCAATGTACCTTGGAAACAGAAGGGTGTTCTGTTGGTTTTAAATCTATTTCGGAAGACAGATTTAACAGCATGGTATGCAACTCATCAAAGGAACATGACAATAACTTTCACCTGAACCTGCTTAGTGATAAATTGGACATCATGGATGACAATTGTTGTTCTTCAAGTGATAATATGGTTCTTAACATGAATCAGCAATTTCAGATATCACAACCAACCGATGATCCGAGGTGTTGCATCAATAGTGAAAGCAGAAATGGTTCATGTTATCAGCATACAAGAACTCTTACTACTTTTGAAAATCATTTCATCAGTAAAACTTACTTGGATTGTGAAGATAGCAGACATGGAGGCGGCGCCGTTTATTCGTCCGTGCAAGATGAAGAAGTACTTAGTTCTCAAAAAAATGAATCTATATCACCTAACTACAAGAAAAATTGGTCTGAGAAAAGCTCTACAAGATCATCAAGGATGATGGAACTTGAGTATGTAAAGGATATACTTAGTAATGCAGAATTAATGGAAGAAGAATTAGTGGTGGATGAGACAAACAATACAATAATGCCAACTCTCTTTGACCCTTTGGAGAATAAAAAAACTGGTGTAGAAAGCTATGAAGAGTACTCTAAGCTTGAAAGGAAAGCTATATTTGATTGTGTAAGAGAGTGCTTAGAATTAAGATGTAGGCAAGTTTTTGTTGCAAGGTGCAAAGCATGGCCTAGATGGGTGGAATCAGTTACTATGAGGAAGAAGAGACACTTAGCAGAAGAAGTGTTTAAGGATATGTTGGAGTTTAGAAGCATGGAAGAAGAGGTAGTTGTGGATGAGATTATTAGCAAGGACATGAGTACTCCATTAGGTAAATGGCTTGACTTTGATATTGAAGTTTCTGAAAATGGCTTAGAACTTGAGCTTGACATAGTAACCTATTTGATAGATGAATTGGTTTATGATTTGTGGCTTGTTTAA 2475 0.3576 MKKRHSKGSFLSFFDWNDKSQKKQFCHIPKLPDVSNQAKENMKIMPMPQIKIDENGENTTYIASSDFNFALSIHSDEECGTNKSLGLVARLMGLDSLPEVPNVSLEYSQFHEINLHSMAHYCNVDSTNTTLKSNKSFSRAIESSTMNKCQNETLHPRSAKPISVTCNKILSPIKCHGYMQSKNASYIKGEDDKIIEASRQSYMRNRMSSVGSLSVPLRTLDLQEKLKTAPHGSKFNVNGKPTIRRSNSYKSSPTVIGSRDSENNNSRRGKGKSGSLVTSSKTNVQSRDTLNLNGNTRYMKQRNCHGESSNVLRQNGVTNKGKLTSKVDTNKPTQTCSSGSSTRARKATNKCAVNSNIESKRSSTRVTDKQKDFSVSKSVSKRKSSSQKKRYDQNDAQCSDNAVNTYVRRSIKCNVTIDESLYQDTFSMEESKDVISFTFTSPLRKKMSKSRSTIEQAMKTRTSTDIDSFDHSDKVYPEKLSLSPTRLDVDELSVMLSHINPPQCTLETEGCSVGFKSISEDRFNSMVCNSSKEHDNNFHLNLLSDKLDIMDDNCCSSSDNMVLNMNQQFQISQPTDDPRCCINSESRNGSCYQHTRTLTTFENHFISKTYLDCEDSRHGGGAVYSSVQDEEVLSSQKNESISPNYKKNWSEKSSTRSSRMMELEYVKDILSNAELMEEELVVDETNNTIMPTLFDPLENKKTGVESYEEYSKLERKAIFDCVRECLELRCRQVFVARCKAWPRWVESVTMRKKRHLAEEVFKDMLEFRSMEEEVVVDEIISKDMSTPLGKWLDFDIEVSENGLELELDIVTYLIDELVYDLWLV 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04028 824 MobiDBLite consensus disorder prediction 239 361 - -
Trre2g04028 824 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 820 - -
Trre2g04028 824 MobiDBLite consensus disorder prediction 230 396 - -
Trre2g04028 824 MobiDBLite consensus disorder prediction 362 378 - -
Trre2g04028 824 Pfam Domain of unknown function (DUF4378) 662 816 IPR025486 -
Trre2g04028 824 Pfam DUF761-associated sequence motif 86 99 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04028 Trre-Chr2 47743308 47747336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04028 1 821 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 29.133 9.21e-67 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04028 - - tpra:123891334 1272.3