Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04027 ATGATAATGAAGAAAAGACATTCCAAGGGAAGTTTCCTTAGCTTCTTTGATTGGAATGATAAATCTCAAAAGAAGCAATTTTGTCACATTCCTAAGTTACCTGATGTTTCAAACCAAGCAAAGGAAAACATGAAAATCATGCCAATGCCACAGATAAAAATAGATGAGAATGGAGAAAATACTACTTATATTGCAAGTAGTGATTTTAACTTTGCCTTATCAATTCATAGTGATGAAGAATGTGGGACTAATAAATCCCTAGGGCTAGTAGCCAGACTCATGGGTTTGGATTCACTTCCTGAAGTTCCAAATGTTTCTCTTGAATATTCTCAGTTTCATGAGATTAATCTTCATTCAATGGCTCACTATTGCAATGTAGATTCCACAAACACAACACTTAAGTCGAACAAGTCTTTTTCGCGTGCCATTGAATCATCGACAATGAATAAATGTCAAAATGAAACTTTGCATCCAAGGTCTGCTAAACCTATTTCAGTTACTTGCAATAAAATTTTGTCTCCTATCAAATGTCATGGTTATATGCAATCTAAGAATGCATCATATATAAAGGGGGAAGATGATAAGATCATTGAGGCGAGTCGCCAATCATATATGAGGAACAGAATGTCTTCAGTTGGTTCTTTATCTGTTCCCTTGAGAACTCTTGATTTGCAAGAGAAATTGAAAACGGCGCCACATGGATCGAAGTTCAATGTGAATGGAAAACCTACTATTAGGAGAAGCAACTCATATAAGTCTAGTCCAACGGTCATAGGTTCAAGAGATTCAGAAAATAATAATTCACGCCGAGGTAAAGGAAAATCTGGTTCGCTTGTAACATCGTCCAAAACCAATGTTCAAAGTAGGGATACATTGAATTTGAATGGAAATACGAGATACATGAAGCAGAGAAATTGTCATGGCGAAAGCAGCAATGTTCTTAGGCAGAATGGTGTGACCAACAAAGGTAAATTAACTTCAAAAGTGGACACTAATAAGCCAACACAAACCTGTTCGTCAGGAAGTTCTACTCGAGCTAGGAAGGCAACAAATAAATGTGCTGTTAATTCCAACATTGAATCCAAAAGGTCAAGCACAAGAGTAACCGATAAGCAAAAGGATTTTTCGGTATCAAAATCGGTATCAAAAAGAAAGAGTTCTTCCCAAAAGAAGAGGTATGATCAAAATGATGCACAATGTTCTGATAATGCAGTTAATACTTATGTAAGAAGGTCTATAAAATGTAATGTTACAATTGATGAAAGTCTTTACCAAGATACATTTAGTATGGAAGAAAGCAAGGATGTCATTTCATTTACATTTACATCTCCATTAAGGAAAAAAATGTCTAAGTCGCGATCCACTATTGAGCAAGCGATGAAAACAAGGACTAGTACTGATATCGATTCTTTTGATCATAGTGATAAGGTTTATCCTGAAAAATTATCATTATCTCCTACCAGGTTAGATGTTGATGAATTAAGTGTCATGTTATCTCACATTAATCCACCTCAATGTACCTTGGAAACAGAAGGGTGTTCTGTTGGTTTTAAATCTATTTCGGAAGACAGATTTAACAGCATGGTATGCAACTCATCAAAGGAACATGACAATAACTTTCACCTGAACCTGCTTAGTGATAAATTGGACATCATGGATGACAATTGTTGTTCTTCAAGTGATAATATGGTTCTTAACATGAATCAGCAATTTCAGATATCACAACCAACCGATGATCCGAGGTGTTGCATCAATAGTGAAAGCAGAAATGGTTCATGTTATCAGCATACAAGAACTCTTACTACTTTTGAAAATCATTTCATCAGTAAAACTTACTTGGATTGTGAAGATAGCAGACATGGCGGCGCCGTTTATTCGTCCGTGCAAGATGAAGAAGTACTTAGTTCTCAAAAAAATGAATCTATATCACCTAACTACAAGAAAAATTGGTCTGAGAAAAGCTCTACAAGATCATCAAGGATGATGGAACTTGAGTATGTAAAGGATATACTTAGTAATGCAGAATTAATGGAAGAAGAATTAGTGGTGGATGAGACAAACAATACAATAATGCCAACTCTCTTTGACCCTTTGGAGAATAAAAAAACTGGTGTAGAAAGCTATGAAGAGTACTCTAAGCTTGAAAGGAAAGCTATATTTGATTGTGTAAGAGAGTGCTTAGAATTAAGATGTAGGCAAGTTTTTGTTGCAAGGTGCAAAGCATGGCCTAGATGGGTGGAATCAGTTACTATGAGGAAGAAGAGACACTTAGCAGAAGAAGTGTTTAAGGATATGTTGGAGTTTAGAAGCATGGAAGAAGAGGTAGTTGTGGATGAGATTATTAGCAAGGACATGAGTACTCCATTAGGTAAATGGCTTGACTTTGATATTGAAGTTTCTGAAAATGGCTTAGAACTTGAGCTTGACATAGTAACCTATTTGATAGATGAATTGGTTTATGATTTGTGGCTTGTTTAA 2478 0.3567 MIMKKRHSKGSFLSFFDWNDKSQKKQFCHIPKLPDVSNQAKENMKIMPMPQIKIDENGENTTYIASSDFNFALSIHSDEECGTNKSLGLVARLMGLDSLPEVPNVSLEYSQFHEINLHSMAHYCNVDSTNTTLKSNKSFSRAIESSTMNKCQNETLHPRSAKPISVTCNKILSPIKCHGYMQSKNASYIKGEDDKIIEASRQSYMRNRMSSVGSLSVPLRTLDLQEKLKTAPHGSKFNVNGKPTIRRSNSYKSSPTVIGSRDSENNNSRRGKGKSGSLVTSSKTNVQSRDTLNLNGNTRYMKQRNCHGESSNVLRQNGVTNKGKLTSKVDTNKPTQTCSSGSSTRARKATNKCAVNSNIESKRSSTRVTDKQKDFSVSKSVSKRKSSSQKKRYDQNDAQCSDNAVNTYVRRSIKCNVTIDESLYQDTFSMEESKDVISFTFTSPLRKKMSKSRSTIEQAMKTRTSTDIDSFDHSDKVYPEKLSLSPTRLDVDELSVMLSHINPPQCTLETEGCSVGFKSISEDRFNSMVCNSSKEHDNNFHLNLLSDKLDIMDDNCCSSSDNMVLNMNQQFQISQPTDDPRCCINSESRNGSCYQHTRTLTTFENHFISKTYLDCEDSRHGGAVYSSVQDEEVLSSQKNESISPNYKKNWSEKSSTRSSRMMELEYVKDILSNAELMEEELVVDETNNTIMPTLFDPLENKKTGVESYEEYSKLERKAIFDCVRECLELRCRQVFVARCKAWPRWVESVTMRKKRHLAEEVFKDMLEFRSMEEEVVVDEIISKDMSTPLGKWLDFDIEVSENGLELELDIVTYLIDELVYDLWLV 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04027 825 MobiDBLite consensus disorder prediction 241 363 - -
Trre2g04027 825 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 821 - -
Trre2g04027 825 Pfam DUF761-associated sequence motif 88 101 IPR032795 -
Trre2g04027 825 MobiDBLite consensus disorder prediction 232 398 - -
Trre2g04027 825 MobiDBLite consensus disorder prediction 364 380 - -
Trre2g04027 825 MobiDBLite consensus disorder prediction 635 654 - -
Trre2g04027 825 Pfam Domain of unknown function (DUF4378) 663 817 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04027 Trre-Chr2 47743302 47747336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04027 2 822 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 29.249 8.05e-68 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04027 - - tpra:123891334 1271.53