Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04026 ATGATAATGAAGAAAAGACATTCCAAGGGAAGTTTCCTTAGCTTCTTTGATTGGAATGATAAATCTCAAAAGAAGCAATTTTGTCACATTCCTAAGTTACCTGATGTTTCAAACCAAGCAAAGGAAAACATGAAAATCATGCCAATGCCACAGATAAAAATAGATGAGAATGGAGAAAATACTACTTATATTGCAAGTAGTGATTTTAACTTTGCCTTATCAATTCATAGTGATGAAGAATGTGGGACTAATAAATCCCTAGGGCTAGTAGCCAGACTCATGGGTTTGGATTCACTTCCTGAAGTTCCAAATGTTTCTCTTGAATATTCTCAGTTTCATGAGATTAATCTTCATTCAATGGCTCACTATTGCAATGTAGATTCCACAAACACAACACTTAAGTCGAACAAGTCTTTTTCGCGTGCCATTGAATCATCGACAATGAATAAATGTCAAAATGAAACTTTGCATCCAAGGTCTGCTAAACCTATTTCAGTTACTTGCAATAAAATTTTGTCTCCTATCAAATGTCATGGTTATATGCAATCTAAGAATGCATCATATATAAAGGGGGAAGATGATAAGATCATTGAGGCGAGTCGCCAATCATATATGAGGAACAGAATGTCTTCAGTTGGTTCTTTATCTGTTCCCTTGAGAACTCTTGATTTGCAAGAGAAATTGAAAACGGCGCCACATGGATCGAAGTTCAATGTGAATGGAAAACCTACTATTAGGAGAAGCAACTCATATAAGTCTAGTCCAACGGTCATAGGTTCAAGAGATTCAGAAAATAATAATTCACGCCGAGGTAAAGGAAAATCTGGTTCGCTTGTAACATCGTCCAAAACCAATGTTCAAAGTAGGGATACATTGAATTTGAATGGAAATACGAGATACATGAAGCAGAGAAATTGTCATGGCGAAAGCAGCAATGTTCTTAGGCAGAATGGTGTGACCAACAAAGGTAAATTAACTTCAAAAGTGGACACTAATAAGCCAACACAAACCTGTTCGTCAGGAAGTTCTACTCGAGCTAGGAAGGCAACAAATAAATGTGCTGTTAATTCCAACATTGAATCCAAAAGGTCAAGCACAAGAGTAACCGATAAGCAAAAGGATTTTTCGGTATCAAAATCGGTATCAAAAAGAAAGAGTTCTTCCCAAAAGAAGAGGTATGATCAAAATGATGCACAATGTTCTGATAATGCAGTTAATACTTATGTAAGAAGGTCTATAAAATGTAATGTTACAATTGATGAAAGTCTTTACCAAGATACATTTAGTATGGAAGAAAGCAAGGATGTCATTTCATTTACATTTACATCTCCATTAAGGAAAAAAATGTCTAAGTCGCGATCCACTATTGAGCAAGCGATGAAAACAAGGACTAGTACTGATATCGATTCTTTTGATCATAGTGATAAGGTTTATCCTGAAAAATTATCATTATCTCCTACCAGGTTAGATGTTGATGAATTAAGTGTCATGTTATCTCACATTAATCCACCTCAATGTACCTTGGAAACAGAAGGGTGTTCTGTTGGTTTTAAATCTATTTCGGAAGACAGATTTAACAGCATGGTATGCAACTCATCAAAGGAACATGACAATAACTTTCACCTGAACCTGCTTAGTGATAAATTGGACATCATGGATGACAATTGTTGTTCTTCAAGTGATAATATGGTTCTTAACATGAATCAGCAATTTCAGATATCACAACCAACCGATGATCCGAGGTGTTGCATCAATAGTGAAAGCAGAAATGGTTCATGTTATCAGCATACAAGAACTCTTACTACTTTTGAAAATCATTTCATCAGTAAAACTTACTTGGATTGTGAAGATAGCAGACATGGAGGCGGCGCCGTTTATTCGTCCGTGCAAGATGAAGAAGTACTTAGTTCTCAAAAAAATGAATCTATATCACCTAACTACAAGAAAAATTGGTCTGAGAAAAGCTCTACAAGATCATCAAGGATGATGGAACTTGAGTATGTAAAGGATATACTTAGTAATGCAGAATTAATGGAAGAAGAATTAGTGGTGGATGAGACAAACAATACAATAATGCCAACTCTCTTTGACCCTTTGGAGAATAAAAAAACTGGTGTAGAAAGCTATGAAGAGTACTCTAAGCTTGAAAGGAAAGCTATATTTGATTGTGTAAGAGAGTGCTTAGAATTAAGATGTAGGCAAGTTTTTGTTGCAAGGTGCAAAGCATGGCCTAGATGGGTGGAATCAGTTACTATGAGGAAGAAGAGACACTTAGCAGAAGAAGTGTTTAAGGATATGTTGGAGTTTAGAAGCATGGAAGAAGAGGTAGTTGTGGATGAGATTATTAGCAAGGACATGAGTACTCCATTAGGTAAATGGCTTGACTTTGATATTGAAGTTTCTGAAAATGGCTTAGAACTTGAGCTTGACATAGTAACCTATTTGATAGATGAATTGGTTTATGATTTGTGGCTTGTTTAA 2481 0.3571 MIMKKRHSKGSFLSFFDWNDKSQKKQFCHIPKLPDVSNQAKENMKIMPMPQIKIDENGENTTYIASSDFNFALSIHSDEECGTNKSLGLVARLMGLDSLPEVPNVSLEYSQFHEINLHSMAHYCNVDSTNTTLKSNKSFSRAIESSTMNKCQNETLHPRSAKPISVTCNKILSPIKCHGYMQSKNASYIKGEDDKIIEASRQSYMRNRMSSVGSLSVPLRTLDLQEKLKTAPHGSKFNVNGKPTIRRSNSYKSSPTVIGSRDSENNNSRRGKGKSGSLVTSSKTNVQSRDTLNLNGNTRYMKQRNCHGESSNVLRQNGVTNKGKLTSKVDTNKPTQTCSSGSSTRARKATNKCAVNSNIESKRSSTRVTDKQKDFSVSKSVSKRKSSSQKKRYDQNDAQCSDNAVNTYVRRSIKCNVTIDESLYQDTFSMEESKDVISFTFTSPLRKKMSKSRSTIEQAMKTRTSTDIDSFDHSDKVYPEKLSLSPTRLDVDELSVMLSHINPPQCTLETEGCSVGFKSISEDRFNSMVCNSSKEHDNNFHLNLLSDKLDIMDDNCCSSSDNMVLNMNQQFQISQPTDDPRCCINSESRNGSCYQHTRTLTTFENHFISKTYLDCEDSRHGGGAVYSSVQDEEVLSSQKNESISPNYKKNWSEKSSTRSSRMMELEYVKDILSNAELMEEELVVDETNNTIMPTLFDPLENKKTGVESYEEYSKLERKAIFDCVRECLELRCRQVFVARCKAWPRWVESVTMRKKRHLAEEVFKDMLEFRSMEEEVVVDEIISKDMSTPLGKWLDFDIEVSENGLELELDIVTYLIDELVYDLWLV 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04026 826 MobiDBLite consensus disorder prediction 241 363 - -
Trre2g04026 826 Pfam DUF761-associated sequence motif 88 101 IPR032795 -
Trre2g04026 826 MobiDBLite consensus disorder prediction 232 398 - -
Trre2g04026 826 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 822 - -
Trre2g04026 826 MobiDBLite consensus disorder prediction 364 380 - -
Trre2g04026 826 Pfam Domain of unknown function (DUF4378) 664 818 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04026 Trre-Chr2 47743302 47747336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04026 2 823 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 28.868 2.48e-67 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04026 - - tpra:123891334 1275.77