Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03997 ATGCCTACTACCAACATAATCACTGATCTTGCTCTCAATCTTTTGAGAGGTCCTTTGAATCCAAATCCAACTACTGCTCGAGATAAATTGATAGCTGAGTTGCAAATTAGATATCGCACGTTTTATGTCGATTATGATATAAACCAAGGTGCAGTAAAGCTACCGAAGATTATGAGAAAAAAATTAACTTATTATGACATTAATGATGGGTTTTTGATCCTGCCATATGAAGATTTTGGTGAGAGGGCTTTGAAGAAGACAACAACTACATTGAATTTAGTTGATGATTGTGGAAACAAGTGGAACTGTGTGCTCATATATGGTTCTTTTCCGTATAAGCATTTTAAGATTGGCGGCGAGTGGAAAAGATTGGTTGCGGCGAGAAGACTTGAAGTCGGTGATCATATAACAGTTGGTGGTTATGTCCGTGAAGAAAATGAAGATCTTTACTTACTAATTTGTCGTTGA 468 0.3675 MPTTNIITDLALNLLRGPLNPNPTTARDKLIAELQIRYRTFYVDYDINQGAVKLPKIMRKKLTYYDINDGFLILPYEDFGERALKKTTTTLNLVDDCGNKWNCVLIYGSFPYKHFKIGGEWKRLVAARRLEVGDHITVGGYVREENEDLYLLICR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03997 155 CDD B3_DNA 56 155 IPR003340 GO:0003677
Trre2g03997 155 Gene3D - 52 155 IPR015300 -
Trre2g03997 155 ProSiteProfiles B3 DNA-binding domain profile. 57 155 IPR003340 GO:0003677
Trre2g03997 155 Pfam B3 DNA binding domain 63 155 IPR003340 GO:0003677
Trre2g03997 155 SUPERFAMILY DNA-binding pseudobarrel domain 57 137 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03997 Trre-Chr2 47345038 47346143 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre2g03997 B3 2.4e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03997 - K01262 tpra:123908244 119.783