Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03970 ATGAGTTTTAGTTCTGAGTTTCTTACATTGATCTTCATCATTATCACATTCTTGATTACTTTATCATCATCACAAAAGACTCACATTTTGAGTGTTGGTGCTTTAATCAATGCAGCTGGAAGTTTCCATGTTCATAGTTTACAAGAAAGCTATTTCTTGAAGGAGAAAAATGAATATGTTCAAGTTGAGAAAATTTCAGGTTTGGATGAGAATGAAGTGAAACATGGTTTTATAGTTGAAAAGTTTAGATCTTTACTTGGTTTAAAGAGTTTCAACAAAAGGGTACATTCTAAATCCAATGGTGATTCTGATTTTAATTCTGATTCTGATTCTGATTCTGATTCTGATCAGTTTCTTACACCTTCACCTTCGCCATCACAAAACATTGAAGCTGAAGTTGCAGCTCTAGCTCCAGCTCCAGCTCCAGCTCCGGCTCCAACACCTTCTGGATTAATCCATTTTCATCCTCATTCTCATCATCAAAAAAATCACTTTCATTGGAACAATCCAGCTAAAAGGTTTCATCATGATGATAATGATGATAGAGGCAAAGCAAAAAAGATACTAGTAGCTGTTTTTGTTTCTGTTGGCATTGTTTCATTGGTTAGTGTTTTTGGTTTAATCTTATTCTGCAGGAAAAAGTTCACAAATCACAAAAAGAAGAAACAAAAAAGAACAATGCCTATAGGTAAGGTGAGTTTAAATCAAGGATTAGATCTATTTTATCTTGATGCATTAGGTGAAGATATTGAACAAAATGGTTGCACAACATTGAAAAAGACTAGTGATGATGAAAATAATAATGTTAGTAGTTCTTTTACTAACGAAATTCAACTAGTAAAAAAAAATGAAAATGATTATGTTGATGAGAAAAATTCTTCTACTTGTGTTGATAAAATTGTTCATGAAAATTGTGATTCATCAGAAGATGAAAGTTTTCATTCATTTGTTGATTCACAATCAAATACAAGACTTTCTAATGCTTCAATTTGTAGTCTTAGTGATCATGACACACATTCTTTGGTGTCACCTCAAAATTCATTTTCATTATTACCAAACCACCAACAATTTCATAGTTCTCCACAAAACTCAATTACAAAAAACACAAATGAAACATTTAGTCCAAAACAAAAATACCAAGATATCGAAAATGAAACATTTGTTCAATCTCCTAAAATATCTACTTTCTCACCACCTCCTCCACCACCAACACCCCCGCCTCCACCACCGCCTACACCACCATTGAAAATGCCACTTTTTTCTTTACATTCACTAACATCTTCATCTAGAGTTTCATCACATTCTCCACTTTCATTGACATCTCATACATTATCTTCACCTATAAATTCAGAATCTTCTTCAAGATCAAATCAAAGGCCTGAAAAAGATTCATTTTCTCCATCTCCATCTAACCTCACAAAATCACCTCTTAGCAATATTCCTCCACCACCATTCCCACCTCCATTTCCAAAAGGAAATAGTAACAATAATGGAAAAACACCACCTCCTCCACCATATCAATTCCCTCAATCACCACTTGGTAAAGATGGTACACCATTGGCTAAACTCAAACCACTTCATTGGGACAAAGTTAGAGCTGCACCAAATCGTACAATGGTTTGGGACAAACTAAGATCAAGCTCATTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGCTATAATTTACAAAGTTCAATTAATAATGATGAAAGTAAGAGCAAAACACCATCTCCAGGGAAGCATGTACTCGATCCAAAAAGGTTGCAGAACATAACAATACTATCAAAAGCTTTGAATGTGACAGCTGAACAAGTATGTGATGCACTAATGCAAGGGAAGGGATTGTCTTTGCAACAATTAGAGGCACTAGTGAAAATGGTACCTACCAAAGAAGAAGAGGCTAAACTCTTCAATTATAAAGGCAACATCAATGAATTGGGGTCCGCAGAAAGGTTTGTGAGAGCAGTGCTTAGTGTACCATTTGCTTTTCAAAGAGTAGAAACCATGCTTTACAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAGGAACTCTTTTTCAATGCTTGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGACTCTTCTTGAAACTACTAGAAGCAGTACTCAAAACGGGAAACCGAATGAATGTCGGAACAATAAGAGGAGGTGCAAGAGCATTCAAACTGGATGCTCTACTGAAGCTAGCAGATGTTAAAGGAACAGATGGAAAAACAACCTTACTCCATTTTGTTGTTCAAGAAATTGTCCGTTCAGAAGGAATAAGAGTTTCAGATAGCATAATGGGAAAAATAAGCCAAAAAAGTAACAAAAACAGAACAGAAGAAGAAAAAGAAGAAGATTACAGAAAAATGGGACTAGAATTAGTTTCTGGTCTAAGTACTGAATTGTACAATGTTAAAAAGACAGCAACAATTGACTTAGATGTTCTTGCTAGTTCAGTTTCAAATCTATATGATGGAATGGTTATGCTGAAACAATTAGTGGAAAATGAGTTGCATGAAGATGAAATGAGTCATAATTTTGTGATGACTATGAAGATATTCTTGCAATATGTTGATGGAAATTTGAAGGAATTGAGAGGTGAAGAAGATAGAGTGATAGCACGTGTTAAAGAAATAACTGAATATTTTCATGGTGATGTTAGTAAAGAAGATAATCCATTAAGGATATTTGTGATAGTGAGAGATTTTATGGGAATGTTGGATCATGTTTGTAAAGAGCTTAGAAAGTCTAAAGGTTCTTCACGTACTCCAAATCCTCTTGCTCCTTTCAAATAG 2808 0.3472 MSFSSEFLTLIFIIITFLITLSSSQKTHILSVGALINAAGSFHVHSLQESYFLKEKNEYVQVEKISGLDENEVKHGFIVEKFRSLLGLKSFNKRVHSKSNGDSDFNSDSDSDSDSDQFLTPSPSPSQNIEAEVAALAPAPAPAPAPTPSGLIHFHPHSHHQKNHFHWNNPAKRFHHDDNDDRGKAKKILVAVFVSVGIVSLVSVFGLILFCRKKFTNHKKKKQKRTMPIGKVSLNQGLDLFYLDALGEDIEQNGCTTLKKTSDDENNNVSSSFTNEIQLVKKNENDYVDEKNSSTCVDKIVHENCDSSEDESFHSFVDSQSNTRLSNASICSLSDHDTHSLVSPQNSFSLLPNHQQFHSSPQNSITKNTNETFSPKQKYQDIENETFVQSPKISTFSPPPPPPTPPPPPPPTPPLKMPLFSLHSLTSSSRVSSHSPLSLTSHTLSSPINSESSSRSNQRPEKDSFSPSPSNLTKSPLSNIPPPPFPPPFPKGNSNNNGKTPPPPPYQFPQSPLGKDGTPLAKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSINNDESKSKTPSPGKHVLDPKRLQNITILSKALNVTAEQVCDALMQGKGLSLQQLEALVKMVPTKEEEAKLFNYKGNINELGSAERFVRAVLSVPFAFQRVETMLYKETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSNKNRTEEEKEEDYRKMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLYDGMVMLKQLVENELHEDEMSHNFVMTMKIFLQYVDGNLKELRGEEDRVIARVKEITEYFHGDVSKEDNPLRIFVIVRDFMGMLDHVCKELRKSKGSSRTPNPLAPFK 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03970 935 MobiDBLite consensus disorder prediction 394 417 - -
Trre2g03970 935 Pfam Formin Homology 2 Domain 516 911 IPR015425 -
Trre2g03970 935 Gene3D Formin, FH2 domain 535 927 IPR042201 -
Trre2g03970 935 MobiDBLite consensus disorder prediction 476 510 - -
Trre2g03970 935 ProSiteProfiles Formin homology-2 (FH2) domain profile. 513 935 IPR015425 -
Trre2g03970 935 SMART it6_source 513 926 IPR015425 -
Trre2g03970 935 MobiDBLite consensus disorder prediction 342 372 - -
Trre2g03970 935 MobiDBLite consensus disorder prediction 421 475 - -
Trre2g03970 935 PANTHER FORMIN-RELATED 436 923 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre2g03970 935 MobiDBLite consensus disorder prediction 138 168 - -
Trre2g03970 935 SUPERFAMILY Formin homology 2 domain (FH2 domain) 526 921 - -
Trre2g03970 935 MobiDBLite consensus disorder prediction 391 521 - -
Trre2g03970 935 MobiDBLite consensus disorder prediction 97 126 - -
Trre2g03970 935 MobiDBLite consensus disorder prediction 106 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03970 Trre-Chr2 46717635 46722031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03970 442 935 FH2 protein (formin) Gene Family AT3G05470 69.522 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03970 - - gmx:100811929 977.237