Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03910 ATGGAAATTAATACAACTACCACTGTACCTGCAGGGCCACTAACTGTTTCTACAAAGAACCATACTTTCATACACCATTACCATAACTTACATTCAGAAAATGATAACCATAGTCATATTGACCATTTTCCTTTCAAAACCATTGTCATAATCATCACCGCGGTTACCTTAATTATGCTCCTATTTACCATTTTTTTGGTTGTATGCTTGATCCGTCGCCAAAAATCTTCCAGCAAAAATGGGATTTGCAAAGATGATTGTGAGAGTAGAGTGCTTCATGACACAAGCAGGAGGCACATCGCTTCAACAATCATGTCCTTTGATTCTAGCCCAGATGTTAAAGGAGGGTGTCTTTATGGGGGAAATTTGAGCAAGACACCAACAACACCTAAATTTAGAGGAGTGCAAGTTTTCACTTATAGGGAGCTAGAAGTTGCTACGAATGGATTCGATGAAGCAAATGTGATTAGTAATGGAGGAGTTAATGGTTTGATATATAAGGGAGTCTTAAATGATGGAACTTTGGCAGCAATTAAGTTACTTCACAGTGAGGGTAAGCAAGGAGAGCGTGCCTTCAGAATAGAGGTTGATCTCCTAAGCCAATTGCGCTCTCCATATTTGGTGGAATTACTTGGCTATTGTGCTGATCAACACCACAGGTTATTGATTTTTGAATACATGCCTAATGGTACACTCCAACACCATCTACATTCCCCTAACAATCAAACACAACCATTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCCTTGGAGTTCCTGCATGAACATTCTATCTCACCCGTGATCCACAGAGACTTCAAGAGCTATAATGTTCTACTGGATCAGAATTTCCGTGCAAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGAAATGGCCAAGTTTCTACCCGTGTGCTTGGGACCACTGGATATTTGGCACCAGAGTACGCCTCCACGGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTACGGTGTAGTTCTTCTCGAATTGCTAACAGGACGTGTACCAGTTGACATTAAGCGGCCCACAGGAGAACATGTCCTTGTGTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAAGTTGTGGAAATGGTTGACCCAGTTCTACACGGACAGTACTCAAAGAAAGCTTTAGTTCAGGTAGCTGCCATCGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCATTGATACCACTTGTGAGGACCCATTCTCTTTCCAGTTCCCTAAGATTTCAGAAACAAATACCAAGTTAA 1338 0.4245 MEINTTTTVPAGPLTVSTKNHTFIHHYHNLHSENDNHSHIDHFPFKTIVIIITAVTLIMLLFTIFLVVCLIRRQKSSSKNGICKDDCESRVLHDTSRRHIASTIMSFDSSPDVKGGCLYGGNLSKTPTTPKFRGVQVFTYRELEVATNGFDEANVISNGGVNGLIYKGVLNDGTLAAIKLLHSEGKQGERAFRIEVDLLSQLRSPYLVELLGYCADQHHRLLIFEYMPNGTLQHHLHSPNNQTQPLDWWARMRIALDCARALEFLHEHSISPVIHRDFKSYNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPTGEHVLVSWALPRLTNREKVVEMVDPVLHGQYSKKALVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRTHSLSSSLRFQKQIPS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03910 445 SUPERFAMILY Protein kinase-like (PK-like) 127 424 IPR011009 -
Trre2g03910 445 CDD STKc_IRAK 156 427 - -
Trre2g03910 445 Gene3D Phosphorylase Kinase; domain 1 123 226 - -
Trre2g03910 445 FunFam Receptor-like serine/threonine-protein kinase ALE2 227 441 - -
Trre2g03910 445 ProSiteProfiles Protein kinase domain profile. 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03910 445 PANTHER OS07G0668900 PROTEIN 131 431 - -
Trre2g03910 445 Gene3D Transferase(Phosphotransferase) domain 1 227 440 - -
Trre2g03910 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Trre2g03910 445 Pfam Protein tyrosine and serine/threonine kinase 160 424 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03910 Trre-Chr2 45634471 45637460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03910 48 437 Receptor kinase-like Gene Family AT3G58690 56.599 1.68e-151 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre2g03910 PK_Tyr_Ser-Thr 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03910 - - gmx:100499645 668.692