Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03876 ATGCTTCTTATTCTTGTTCTTACTTCATCCACAATTTCTCATCCTTCTCCTCAACAATCAATCAATCAAACAAACCTTCTTACGTACGGATCTGCACTCTTAAACCATCTTTCTTCTTCTAAATTCCAATCCAATCCAATGGCTGGTAGTAACCAACAACTAAACCCCAACGATTCCAAGATGGTGGTTCCGTTGAACATGTGGGTTTTGATCTCTAATTTTAAGTTAGCATACAATCTTCTCCGTCGTCCTGATGGAACATTCAACCGTGACTTGGCAGAGTTTCTTGATCGAAAAGTTCCGGCGAATGCCAACCCTGTGGATGGAGTTTTCTCATTTGATGTCATTGTTGACAGGGAAACTAATCTCCTTACTCGAATCTACCGTCCTGTTGAGGGAGATGAAAATAATGTGAACATTGTTGATCTTGAGAAGCCAGTTACCGCTGAGGTTCTTCCTGTCCTCGTGTTTTTCCATGGTGGAAGTTTTGCACATTCTTCGGCTAATAGTGCTATATATGATACCTTGTGTCGTCGATTGGTTGGTATTTGTAATGCTGTTGTTGTCTCTGTGAATTATAGGCGTGAGCCTGAAAATAGGTATCCTTGTGCTTATGAAGATGGGTGGAAAGCTCTTGAATGGGTTAGTTCTAGAGCTTGGCTACAGAGCAAAAAGGATAACAAGGTTCACATCTACATGGTTGGTGATAGCTCAGGCGGGAACATTGTTCACAATGTTGCCTTGAAAGCTTTGGACTCTGGTATTCAGGTTTTGGGGAATATACTGCTCAATCCATTGTTTGGCGGGGAAGAAAGAACAGAATCTGAAAAGCGTCTCGATGGGAGGTATTTTGTTAGAGTTAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCCGAAGGGGAAGACAGAGATCATCACGCGTGTAGCCCTTTTGGTCCCAATTGGGTTATGCCAAAGGACTTGAGAAAGGTGGACAAAATGTGA 987 0.4215 MLLILVLTSSTISHPSPQQSINQTNLLTYGSALLNHLSSSKFQSNPMAGSNQQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGDENNVNIVDLEKPVTAEVLPVLVFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRREPENRYPCAYEDGWKALEWVSSRAWLQSKKDNKVHIYMVGDSSGGNIVHNVALKALDSGIQVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACSPFGPNWVMPKDLRKVDKM 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03876 328 Gene3D alpha/beta hydrolase 42 325 IPR029058 -
Trre2g03876 328 PANTHER ARYLACETAMIDE DEACETYLASE 85 311 - -
Trre2g03876 328 Pfam alpha/beta hydrolase fold 155 313 IPR013094 GO:0016787
Trre2g03876 328 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 155 171 IPR002168 GO:0016787
Trre2g03876 328 SUPERFAMILY alpha/beta-Hydrolases 80 314 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03876 Trre-Chr2 44812742 44814379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03876 47 314 Carbohydrate Esterase AT3G05120 74.349 4.33e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03876 K14493 - gmx:100815161 505.368