Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03874 ATGGAGTGCAACAAGGACGAGGCTGTGAGGGCTAAGCAATTGGCAGAAAGTAGAATGCAAAGGGGTCAATTTGTTGAGGCACTGAAGTTTGCTAACAAGGCCAAAAAGCTGTATGCCGAAGTTGATAATATTGCTCAGATCCTTGCAATTTGTGAGGTGAACATTGCTGCATCGAACAAACTCTCTAGTTCTGAAATGGACTGGTATCGAATTCTTCAGACAGAAAGACTCTCCGAGGAAGCAATCATAAAGAAACAGTACAGAAAGCTTGCATTGCTACTTCATCCTGATAAAAATAAATTAGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATAGGGTGTTGAGTGACCAAGCAAAGCGATGTTTACATGACATGAAGGTTAAAGCTCATGTGAGAGCTGCGGTACCTAAGACCTCATCCCATCACTCAAATTGGAACATGTTTGCAGCAAATCAAGTTCCAAATGCAACAAAATTTCAGAAAAAACGTTCTTCAAATGGGAACATGTTTGAAGTGTTGACCCCTGAGGTGCGGGAAATTTTAGACAGACTGACGCAGCAGCTGCAGTCTCAAAACAAGCTATTAGAAATGTTGAGGGAAAGAATGGACCGGTTGGAGCAGCGAGCAAAAAAGAGAAGAAAATGGAAAGAATGA 666 0.4219 MECNKDEAVRAKQLAESRMQRGQFVEALKFANKAKKLYAEVDNIAQILAICEVNIAASNKLSSSEMDWYRILQTERLSEEAIIKKQYRKLALLLHPDKNKLAGAEAAFKLIGEANRVLSDQAKRCLHDMKVKAHVRAAVPKTSSHHSNWNMFAANQVPNATKFQKKRSSNGNMFEVLTPEVREILDRLTQQLQSQNKLLEMLRERMDRLEQRAKKRRKWKE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03874 221 Coils Coil 185 212 - -
Trre2g03874 221 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Trre2g03874 221 SMART dnaj_3 66 123 IPR001623 -
Trre2g03874 221 CDD DnaJ 67 120 IPR001623 -
Trre2g03874 221 Gene3D DnaJ domain 64 178 IPR036869 -
Trre2g03874 221 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Trre2g03874 221 PRINTS DnaJ domain signature 103 123 IPR001623 -
Trre2g03874 221 PRINTS DnaJ domain signature 215 221 IPR001623 -
Trre2g03874 221 PRINTS DnaJ domain signature 69 87 IPR001623 -
Trre2g03874 221 PRINTS DnaJ domain signature 87 102 IPR001623 -
Trre2g03874 221 Pfam DnaJ domain 67 128 IPR001623 -
Trre2g03874 221 PANTHER BNAC03G44070D PROTEIN 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03874 Trre-Chr2 44755471 44756136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03874 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.405 3.93e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03874 - - tpra:123884658 295.819